Normalization and experimental design for ChIP-chip data (Q31116872)

10 August 2017

Normalization and experimental design for ChIP-chip data (English)

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10 August 2017

Shouyong Peng

1

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10 August 2017

Artyom A Alekseyenko

2

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10 August 2017

Erica Larschan

3

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10 August 2017

Mitzi I Kuroda

4

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10 August 2017

Peter J Park

5

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10 August 2017

25 June 2007

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10 August 2017

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10 August 2017

8

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10 August 2017

219

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https://scigraph.springernature.com/pub.10.1186/1471-2105-8-219

10 August 2017

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cites work

Extrapolating traditional DNA microarray statistics to tiling and protein microarray technologies

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Statistics for ChIP-chip and DNase hypersensitivity experiments on NimbleGen arrays

21 June 2018

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High-resolution computational models of genome binding events.

21 June 2018

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Model-based analysis of tiling-arrays for ChIP-chip.

21 June 2018

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Detecting transcriptionally active regions using genomic tiling arrays

21 June 2018

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Genome-wide analysis of Polycomb targets in Drosophila melanogaster

21 June 2018

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High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome

21 June 2018

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ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data

21 June 2018

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Chipper: discovering transcription-factor targets from chromatin immunoprecipitation microarrays using variance stabilization

21 June 2018

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Global regulation of X chromosomal genes by the MSL complex in Drosophila melanogaster

21 June 2018

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Genome-wide map of nucleosome acetylation and methylation in yeast

21 June 2018

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A high-resolution map of active promoters in the human genome

21 June 2018

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Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping

21 June 2018

1 reference

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A hidden Markov model for analyzing ChIP-chip experiments on genome tiling arrays and its application to p53 binding sequences

21 June 2018

1 reference

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Genomic maps and comparative analysis of histone modifications in human and mouse

21 June 2018

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

21 June 2018

1 reference

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Transcriptional regulatory networks in Saccharomyces cerevisiae

21 June 2018

1 reference

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Profound effect of normalization on detection of differentially expressed genes in oligonucleotide microarray data analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913544

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913544

Mapping global histone acetylation patterns to gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913544

25 November 2018

Identifiers

DOI

10.1186/1471-2105-8-219

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journals/bmcbi/PengALKP07

10 August 2017

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DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

10 August 2017

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