Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse (Q31139560)

21 August 2017

Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse (English)

1 reference

21 August 2017

1 reference

Chongzhi Zang

0 references

Tao Liu

object named as

Tao Liu

11

0 references

Myles Brown

12

object named as

Myles Brown

1 reference

21 August 2017

Shenglin Mei

1

1 reference

21 August 2017

Qian Qin

2

1 reference

21 August 2017

Qiu Wu

3

1 reference

21 August 2017

Hanfei Sun

4

1 reference

21 August 2017

Rongbin Zheng

5

1 reference

21 August 2017

Muyuan Zhu

7

1 reference

21 August 2017

Jiaxin Wu

8

1 reference

21 August 2017

Xiaohui Shi

9

1 reference

21 August 2017

Len Taing

10

1 reference

21 August 2017

Clifford A Meyer

13

1 reference

21 August 2017

X Shirley Liu

14

1 reference

21 August 2017

language of work or name

English

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publication date

26 October 2016

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21 August 2017

Nucleic Acids Research

1 reference

21 August 2017

45

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21 August 2017

D1

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21 August 2017

D658-D662

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Creative Commons Attribution-NonCommercial 4.0 International

21 August 2017

start time

4 January 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

1 reference

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Biocuration of functional annotation at the European nucleotide archive.

21 June 2018

1 reference

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The UCSC Genome Browser database: 2016 update

21 June 2018

1 reference

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Identifying and mitigating bias in next-generation sequencing methods for chromatin biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Target analysis by integration of transcriptome and ChIP-seq data with BETA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

CR Cistrome: a ChIP-Seq database for chromatin regulators and histone modification linkages in human and mouse

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

BloodChIP: a database of comparative genome-wide transcription factor binding profiles in human blood cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

A quality control system for profiles obtained by ChIP sequencing.

21 June 2018

1 reference

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Transcriptional regulation and its misregulation in disease.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

NCBI GEO: archive for functional genomics data sets--update

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

ChIP-seq and beyond: new and improved methodologies to detect and characterize protein-DNA interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Landscape of transcription in human cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Architecture of the human regulatory network derived from ENCODE data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

The accessible chromatin landscape of the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Cistrome: an integrative platform for transcriptional regulation studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

The NIH Roadmap Epigenomics Mapping Consortium

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

ChIP-seq: advantages and challenges of a maturing technology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Fast and accurate short read alignment with Burrows-Wheeler transform

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Histone modifications at human enhancers reflect global cell-type-specific gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

ChIP-seq: using high-throughput sequencing to discover protein-DNA interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Model-based analysis of ChIP-Seq (MACS)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

High-resolution profiling of histone methylations in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210658

Exploring long-range genome interactions using the WashU Epigenome Browser

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKW983

21 January 2018

Identifiers

DOI

10.1093/NAR/GKW983

1 reference

journals/nar/MeiQWSZZZWSTLBM17

21 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

21 August 2017

PubMed publication ID

27789702

1 reference