Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: implication for land plant evolution (Q31146497)

14 September 2017

Comparative genomics of Physcomitrella patens gametophytic transcriptome and Arabidopsis thaliana: implication for land plant evolution (English)

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14 September 2017

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Physcomitrella patens

Physcomitrella patens

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Mitsuyasu Hasebe

12

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Piero Carninci

Piero Carninci

8

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Kazuo Shinozaki

Kazuo Shinozaki

10

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Yoshihide Hayashizaki

9

Yoshihide Hayashizaki

1 reference

14 September 2017

Motoaki Seki

4

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Ikuo Uchiyama

Ikuo Uchiyama

6

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Asako Kamiya

7

Asako Kamiya

1 reference

14 September 2017

2

Tomomichi Fujita

1 reference

14 September 2017

3

Tadasu Shin-I

1 reference

14 September 2017

11

Yuji Kohara

1 reference

14 September 2017

5

Hiroyo Nishide

1 reference

14 September 2017

Tomoaki Nishiyama

1

1 reference

PMCID

164703

14 September 2017

language of work or name

English

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publication date

13 June 2003

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Proceedings of the National Academy of Sciences of the United States of America

14 September 2017

6

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based on heuristic

inferred from page(s)

published in

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14 September 2017

100

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14 September 2017

8007-8012

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14 September 2017

13

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The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

A computer-based method of selecting clones for a full-length cDNA project: simultaneous collection of negligibly redundant and variant cDNAs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Resources for full-length cDNAs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Functional annotation of a full-length Arabidopsis cDNA collection

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

The closest living relatives of land plants

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Establishment and maintenance of sister chromatid cohesion in fission yeast by a unique mechanism

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Protein-protein interaction panel using mouse full-length cDNAs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Balanced-size and long-size cloning of full-length, cap-trapped cDNAs into vectors of the novel lambda-FLC family allows enhanced gene discovery rate and functional analysis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Cloning full-length, cap-trapper-selected cDNAs by using the single-strand linker ligation method

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Cytokinin oxidase or dehydrogenase? Mechanism of cytokinin degradation in cereals

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Computer-based methods for the mouse full-length cDNA encyclopedia: real-time sequence clustering for construction of a nonredundant cDNA library.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

RefSeq and LocusLink: NCBI gene-centered resources

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

The InterPro database, an integrated documentation resource for protein families, domains and functional sites

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Gene ontology: tool for the unification of biology

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Fission yeast Eso1p is required for establishing sister chromatid cohesion during S phase

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Tagged mutagenesis and gene-trap in the moss, Physcomitrella patens by shuttle mutagenesis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Database resources of the National Center for Biotechnology Information.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

CapSelect: a highly sensitive method for 5' CAP-dependent enrichment of full-length cDNA in PCR-mediated analysis of mRNAs.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

CAP3: A DNA sequence assembly program

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Sequence analysis of expressed sequence tags from an ABA-treated cDNA library identifies stress response genes in the moss Physcomitrella patens

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

High-efficiency cloning of Arabidopsis full-length cDNA by biotinylated CAP trapper

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Characterization of MADS homeotic genes in the fern Ceratopteris richardii

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Plant nuclear gene knockout reveals a role in plastid division for the homolog of the bacterial cell division protein FtsZ, an ancestral tubulin

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Base-calling of automated sequencer traces using phred. II. Error probabilities

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Efficient gene targeting in the moss Physcomitrella patens

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

High efficiency selection of full-length cDNA by improved biotinylated cap trapper.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

High-efficiency full-length cDNA cloning by biotinylated CAP trapper

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Expression of myb-related genes in the moss, Physcomitrella patens

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Mosses do express conventional, distantly B-type-related phytochromes. Phytochrome of Physcomitrella patens (Hedw.).

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

Sister chromatids are preferred over homologs as substrates for recombinational repair in Saccharomyces cerevisiae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

The early genetic response to light in the green unicellular alga Chlamydomonas eugametos grown under light/dark cycles involves genes that represent direct responses to light and photosynthesis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=164703

The origin and early evolution of plants on land

14 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Development, Genetics and Molecular Biology of Mosses

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Characterization and expression of the phytochrome gene family in the moss Ceratodon purpureus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Phytochrome control of phototropism and chlorophyll accumulation in the apical cells of protonemal filaments of wildtype and an aphototropic mutant of the moss Ceratodon purpureus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Multiubiquitin chain binding subunit MCB1 (RPN10) of the 26S proteasome is essential for developmental progression in Physcomitrella patens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Cryptochrome light signals control development to suppress auxin sensitivity in the moss Physcomitrella patens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Cloning and functional characterisation of an enzyme involved in the elongation of Delta6-polyunsaturated fatty acids from the moss Physcomitrella patens

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Functional knockout of the adenosine 5'-phosphosulfate reductase gene in Physcomitrella patens revives an old route of sulfate assimilation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Moss transcriptome and beyond.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Isolation and characterization of the orchid cytokinin oxidase DSCKX1 promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Isolation of homeodomain-leucine zipper genes from the moss Physcomitrella patens and the evolution of homeodomain-leucine zipper genes in land plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Arabidopsis encyclopedia using full-length cDNAs and its application

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

Molecular Responses to Abscisic Acid and Stress Are Conserved between Moss and Cereals

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0932694100

21 January 2018

Identifiers

DOI

10.1073/PNAS.0932694100

1 reference

14 September 2017

0 references

1 reference

14 September 2017

1 reference

PMCID

164703