PhosphoScore: an open-source phosphorylation site assignment tool for MSn data (Q31158709)

17 August 2017

PhosphoScore: an open-source phosphorylation site assignment tool for MSn data (English)

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17 August 2017

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2

Trairak Pisitkun

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17 August 2017

3

Mark A Knepper

1 reference

17 August 2017

Brian E Ruttenberg

1

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PMCID

2562657

17 August 2017

Jason D Hoffert

series ordinal

4

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17 August 2017

11 June 2008

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Journal of Proteome Research

17 August 2017

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17 August 2017

7

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17 August 2017

7

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17 August 2017

3054-3059

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

An automated platform for analysis of phosphoproteomic datasets: application to kidney collecting duct phosphoproteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Multiple reaction monitoring for robust quantitative proteomic analysis of cellular signaling networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Automatic validation of phosphopeptide identifications from tandem mass spectra

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Quantitative phosphoproteomics of vasopressin-sensitive renal cells: regulation of aquaporin-2 phosphorylation at two sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Quantitative phosphoproteomic analysis of the tumor necrosis factor pathway

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Large-scale characterization of HeLa cell nuclear phosphoproteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Stochastic Relaxation, Gibbs Distributions, and the Bayesian Restoration of Images

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

PepHMM: a hidden Markov model based scoring function for mass spectrometry database search.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2562657

31 October 2018

Identifiers

DOI

10.1021/PR800169K

1 reference

17 August 2017

1 reference

17 August 2017

1 reference

PMCID

2562657