Control of translation initiation: a model-based analysis from limited experimental data (Q31159915)

13 October 2017

Control of translation initiation: a model-based analysis from limited experimental data (English)

1 reference

13 October 2017

Richard J Dimelow

1

1 reference

PMC publication ID

2610325

13 October 2017

Stephen J Wilkinson

series ordinal

2

1 reference

13 October 2017

1 January 2009

1 reference

Journal of the Royal Society Interface

13 October 2017

1 reference

13 October 2017

6

1 reference

13 October 2017

30

1 reference

13 October 2017

51-61

1 reference

Universally sloppy parameter sensitivities in systems biology models

13 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Ensemble modeling for analysis of cell signaling dynamics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Distributed control for recruitment, scanning and subunit joining steps of translation initiation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

A model for protein translation: polysome self-organization leads to maximum protein synthesis rates.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

From in vivo to in silico biology and back

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

How can biochemical reactions within cells differ from those in test tubes?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Localization of the translational guanine nucleotide exchange factor eIF2B: a common theme for GEFs?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

eIF2B, a mediator of general and gene-specific translational control

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Dynamic cycling of eIF2 through a large eIF2B-containing cytoplasmic body: implications for translation control

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Global analysis of protein expression in yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

A multifactor complex of eukaryotic initiation factors, eIF1, eIF2, eIF3, eIF5, and initiator tRNA(Met) is an important translation initiation intermediate in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Yeast exosome mutants accumulate 3'-extended polyadenylated forms of U4 small nuclear RNA and small nucleolar RNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

A sampling of the yeast proteome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Posttranscriptional control of gene expression in yeast.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

eIF2 independently binds two distinct eIF2B subcomplexes that catalyze and regulate guanine-nucleotide exchange.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

T-cell activation leads to rapid stimulation of translation initiation factor eIF2B and inactivation of glycogen synthase kinase-3

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

21 June 2018

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Mathematical modelling of translation of mRNA in eucaryotes; steady state, time-dependent processes and application to reticulocytes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

A Linear Steady-State Treatment of Enzymatic Chains. General Properties, Control and Effector Strength

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Getting started with yeast

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Translation initiation in Escherichia coli: old and new questions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

High-throughput classification of yeast mutants for functional genomics using metabolic footprinting.

21 June 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Traffic of interacting ribosomes: effects of single-machine mechanochemistry on protein synthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Bringing metabolic networks to life: convenience rate law and thermodynamic constraints

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Realistic protein-protein association rates from a simple diffusional model neglecting long-range interactions, free energy barriers, and landscape ruggedness

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Systems Biology Toolbox for MATLAB: a computational platform for research in systems biology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Dynamic model of the process of protein synthesis in eukaryotic cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Toward realistic modeling of dynamic processes in cell signaling: quantification of macromolecular crowding effects.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Proximate parameter tuning for biochemical networks with uncertain kinetic parameters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Metabolic channelling and control of the flux

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2008.0221

Translation factor control of ribosome conformation during start codon selection.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2610325

Catalysis of guanine nucleotide exchange on eIF2 by eIF2B: can it be both a substituted enzyme and a sequential mechanism?

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18567568

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Intracellular translation initiation factor levels in Saccharomyces cerevisiae and their role in cap-complex function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18567568

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1098/RSIF.2008.0221

1 reference

13 October 2017

1 reference

PMC publication ID

2610325

13 October 2017

PubMed publication ID

18567568

1 reference

PMC publication ID

2610325