Whole-genome analyses of Korean native and Holstein cattle breeds by massively parallel sequencing (Q31172431)

5 November 2017

Whole-genome analyses of Korean native and Holstein cattle breeds by massively parallel sequencing (English)

1 reference

5 November 2017

whole genome sequencing

1 reference

15

Namshin Kim

1 reference

PubMed publication ID

29 June 2017

3

Paul Stothard

1 reference

5 November 2017

Jung-Woo Choi

1

1 reference

5 November 2017

Xiaoping Liao

2

1 reference

5 November 2017

Won-Hyong Chung

4

1 reference

5 November 2017

Heoyn-Jeong Jeon

5

1 reference

5 November 2017

Stephen P Miller

6

1 reference

5 November 2017

So-Young Choi

7

1 reference

5 November 2017

Jeong-Koo Lee

8

1 reference

5 November 2017

Bokyoung Yang

9

1 reference

5 November 2017

Kyung-Tai Lee

10

1 reference

5 November 2017

Kwang-Jin Han

11

1 reference

5 November 2017

Hyeong-Cheol Kim

12

1 reference

5 November 2017

Dongkee Jeong

13

1 reference

5 November 2017

Jae-Don Oh

14

1 reference

5 November 2017

Tae-Hun Kim

16

1 reference

5 November 2017

Hak-Kyo Lee

17

1 reference

5 November 2017

Sung-Jin Lee

18

1 reference

5 November 2017

language of work or name

English

0 references

publication date

3 July 2014

1 reference

5 November 2017

1 reference

5 November 2017

9

1 reference

5 November 2017

7

1 reference

5 November 2017

e101127

1 reference

Creative Commons Attribution 4.0 International

5 November 2017

start time

3 July 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Effect of Population Reduction on mtDNA Diversity and Demographic History of Korean Cattle Populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Massively parallel sequencing of Chikso (Korean brindle cattle) to discover genome-wide SNPs and InDels

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Whole-genome resequencing of Hanwoo (Korean cattle) and insight into regions of homozygosity

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Genome-wide copy number variation in Hanwoo, Black Angus, and Holstein cattle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Update on activities at the Universal Protein Resource (UniProt) in 2013

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Genome-wide identification of copy number variations in Chinese Holstein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

An integrated map of genetic variation from 1,092 human genomes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Fine mapping of copy number variations on two cattle genome assemblies using high density SNP array

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Copy number variation of individual cattle genomes using next-generation sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Database resources of the National Center for Biotechnology Information

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Genomic characteristics of cattle copy number variations.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Whole-genome resequencing shows numerous genes with nonsynonymous SNPs in the Japanese native cattle Kuchinoshima-Ushi

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

agriGO: a GO analysis toolkit for the agricultural community

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Identification of copy number variations and common deletion polymorphisms in cattle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Analysis of copy number variations among diverse cattle breeds.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

The Sequence Alignment/Map format and SAMtools

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Fast and accurate short read alignment with Burrows-Wheeler transform

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

BioMart Central Portal--unified access to biological data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Genome wide signatures of positive selection: the comparison of independent samples and the identification of regions associated to traits

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

A whole-genome assembly of the domestic cow, Bos taurus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Development and characterization of a high density SNP genotyping assay for cattle

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

The genome sequence of taurine cattle: a window to ruminant biology and evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

CNV-seq, a new method to detect copy number variation using high-throughput sequencing

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Prolactin regulation of mammary gland development.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Biology of epidermal and hair pigmentation in cattle: a mini-review

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Weaning induces NOS-2 expression through NF-kappaB modulation in the lactating mammary gland: importance of GSH.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Manipulation of amino acid supply to the growing ruminant

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4081042

Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle.

28 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

Genome-wide association studies for feedlot and growth traits in cattle.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

Genome wide association studies for milk production traits in Chinese Holstein population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

Whole genome sequencing of a single Bos taurus animal for single nucleotide polymorphism discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

Ruminal and abomasal starch hydrolysate infusions selectively decrease the expression of cationic amino acid transporter mRNA by small intestinal epithelia of forage-fed beef steers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

The role of melanocyte-stimulating hormone (MSH) receptor in bovine coat color determination

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

Inbreeding effects on milk production, calving performance, fertility, and conformation in Irish Holstein-Friesians.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0101127

A whole genome scan to map QTL for milk production traits and somatic cell score in Canadian Holstein bulls

21 January 2018

1 reference

12 December 2020

The presence of nitric oxide synthase in the mammary glands of lactating rats

1 reference

12 December 2020

Whole genome single nucleotide polymorphism associations with feed intake and feed efficiency in beef cattle

1 reference

12 December 2020

Nitric oxide triggers mammary gland involution after weaning: remodelling is delayed but not impaired in mice lacking inducible nitric oxide synthase

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0101127

Identifiers

DOI

1 reference

5 November 2017

0 references

1 reference

5 November 2017

PubMed publication ID

24992012

1 reference