Bacterial-type DNA holliday junction resolvases in eukaryotic viruses (Q31782738)

3 September 2017

Bacterial-type DNA holliday junction resolvases in eukaryotic viruses (English)

1 reference

3 September 2017

3

Koonin EV

1 reference

3 September 2017

4

Moss B

1 reference

3 September 2017

Garcia AD

1

1 reference

PMCID

16798

3 September 2017

Aravind L

series ordinal

2

1 reference

PMCID

16798

3 September 2017

language of work or name

English

0 references

publication date

1 August 2000

1 reference

Proceedings of the National Academy of Sciences of the United States of America

3 September 2017

1 reference

3 September 2017

97

1 reference

3 September 2017

16

1 reference

3 September 2017

8926-8931

1 reference

Protein secondary structure prediction based on position-specific scoring matrices

3 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

A Holliday junction resolvase from Pyrococcus furiosus: functional similarity to Escherichia coli RuvC provides evidence for conserved mechanism of homologous recombination in Bacteria, Eukarya, and Archaea

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Shope fibroma virus DNA topoisomerase catalyses holliday junction resolution and hairpin formation in vitro

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Characterization of a Holliday junction-resolving enzyme from Schizosaccharomyces pombe

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Protein fold recognition by prediction-based threading

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Resolution of Holliday junctions by eukaryotic DNA topoisomerase I

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Prediction of protein secondary structure at better than 70% accuracy

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Atomic structure of the RuvC resolvase: a holliday junction-specific endonuclease from E. coli

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Processing of intermediates in recombination and DNA repair: identification of a new endonuclease that specifically cleaves Holliday junctions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

The mechanism of cytoplasmic orthopoxvirus DNA replication

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Characterization and localization of the naturally occurring cross-links in vaccinia virus DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

A vaccinia virus DNase preparation which cross-links superhelical DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Molecular cloning and sequence of the concatemer junction from vaccinia virus replicative DNA. Viral nuclease cleavage sites in cruciform structures

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Vectors for selective expression of cloned DNAs by T7 RNA polymerase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Resolution of linear minichromosomes with hairpin ends from circular plasmids containing vaccinia virus concatemer junctions

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Gene 3 endonuclease of bacteriophage T7 resolves conformationally branched structures in double-stranded DNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Replication and resolution of cloned poxvirus telomeres in vivo generates linear minichromosomes with intact viral hairpin termini.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Resolution of vaccinia virus DNA concatemer junctions requires late-gene expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Identification of temperature-sensitive mutants of vaccinia virus that are defective in conversion of concatemeric replicative intermediates to the mature linear DNA genome

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Intramolecular homologous recombination in cells infected with temperature-sensitive mutants of vaccinia virus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

A workbench for multiple alignment construction and analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Resolution of Holliday junctions in vitro requires the Escherichia coli ruvC gene product

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Formation and resolution of recombination intermediates by E. coli RecA and RuvC proteins.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

In vitro resolution of poxvirus replicative intermediates into linear minichromosomes with hairpin termini by a virally induced Holliday junction endonuclease

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Escherichia coli RuvC protein is an endonuclease that resolves the Holliday structure

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Identification and characterization of yeast mutants and the gene for a cruciform cutting endonuclease

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Function of gene 49 of bacteriophage T4. II. Analysis of intracellular development and the structure of very fast-sedimenting DNA

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

A mechanism for gene conversion in fungi

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Crystal structure of a DNA Holliday junction

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Incompletely base-paired flip-flop terminal loops link the two DNA strands of the vaccinia virus genome into one uninterrupted polynucleotide chain

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Cruciform extrusion in plasmids bearing the replicative intermediate configuration of a poxvirus telomere.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Identification of four acidic amino acids that constitute the catalytic center of the RuvC Holliday junction resolvase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Gleaning non-trivial structural, functional and evolutionary information about proteins by iterative database searches

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Substrate specificity of the Escherichia coli RuvC protein. Resolution of three- and four-stranded recombination intermediates.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

Structure and replication of vaccinia virus telomeres

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=16798

T4 endonuclease VII cleaves holliday structures

31 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

[Genetic studies with mammalian poxviruses. I. Demonstration of recombination between two strains of vaccina virus]

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

A new Holliday junction resolving enzyme from Schizosaccharomyces pombe that is homologous to CCE1 from Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

Yeast and viral RNA 5' triphosphatases comprise a new nucleoside triphosphatase family

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.150238697

The site-specific cleavage of synthetic Holliday junction analogs and related branched DNA structures by bacteriophage T7 endonuclease I

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10890916

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.150238697

1 reference

3 September 2017

0 references

1 reference

3 September 2017

1 reference

PMCID

16798