Molecular dynamics simulation of melittin in a dimyristoylphosphatidylcholine bilayer membrane (Q32018430)

5 July 2017

Molecular dynamics simulation of melittin in a dimyristoylphosphatidylcholine bilayer membrane (English)

1 reference

molecular dynamics simulation

5 July 2017

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author name string

Bernèche S

series ordinal

1

1 reference

5 July 2017

Nina M

series ordinal

2

1 reference

5 July 2017

Roux B

series ordinal

3

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5 July 2017

language of work or name

English

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publication date

1 October 1998

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5 July 2017

16

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based on heuristic

inferred from page(s)

published in

Biophysical Journal

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5 July 2017

75

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5 July 2017

4

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5 July 2017

1603-1618

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The Photosynthetic Reaction Center from the Purple Bacterium Rhodopseudomonas viridis.

5 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Pore formation and translocation of melittin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Determination of molecular order in supported lipid membranes by internal reflection Fourier transform infrared spectroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

On simulating lipid bilayers with an applied surface tension: periodic boundary conditions and undulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Free-energy determinants of alpha-helix insertion into lipid bilayers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The infrared dichroism of transmembrane helical polypeptides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Stopped-flow fluorometric study of the interaction of melittin with phospholipid bilayers: importance of the physical state of the bilayer and the acyl chain length

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Incorporation of surface tension into molecular dynamics simulation of an interface: a fluid phase lipid bilayer membrane

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Area/lipid of bilayers from NMR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Molecular dynamics simulations of a lipid bilayer and of hexadecane: an investigation of membrane fluidity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Prostaglandin H synthase: implications for membrane structure.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Structure and orientation of the pore-forming peptide, melittin, in lipid bilayers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Classical electrostatics in biology and chemistry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Modulation of melittin-induced lysis by surface charge density of membranes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Interaction of an amphiphilic peptide with a phospholipid bilayer surface by molecular dynamics simulation study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Structure and fluctuations of bacteriorhodopsin in the purple membrane: a molecular dynamics study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Molecular dynamics simulation of the gramicidin channel in a phospholipid bilayer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The structure of melittin in the form I crystals and its implication for melittin's lytic and surface activities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

High resolution nuclear magnetic resonance studies of the conformation and orientation of melittin bound to a lipid-water interface

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The sting. Melittin forms channels in lipid bilayers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Sequence analysis of melittin from tryptic and peptic degradation products

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Protein structure by solid state nuclear magnetic resonance. Residues 40 to 45 of bacteriophage fd coat protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Molecular details of melittin-induced lysis of phospholipid membranes as revealed by deuterium and phosphorus NMR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The structure of melittin in membranes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

A deuterium and phosphorus-31 nuclear magnetic resonance study of the interaction of melittin with dimyristoylphosphatidylcholine bilayers and the effects of contaminating phospholipase A2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Energetics of charge-charge interactions in proteins.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Interaction of melittin with phosphatidylcholine membranes. Binding isotherm and lipid head-group conformation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The nature of the hydrophobic binding of small peptides at the bilayer interface: implications for the insertion of transbilayer helices

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Amphipathic helix motif: classes and properties

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The actions of melittin on membranes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Model for the structure of the lipid bilayer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Hemolytic and antimicrobial activities of the twenty-four individual omission analogues of melittin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Orientation of melittin in phospholipid bilayers. A polarized attenuated total reflection infrared study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Melittin-induced changes in lipid multilayers. A solid-state NMR study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Hydration at the membrane protein-lipid interface

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Interaction of melittin derivatives with lipid bilayer membrane. Role of basic residues at the C-terminal and their replacement with lactose

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The interaction of bee melittin with lipid bilayer membranes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Dimerization of truncated melittin analogues results in cytolytic peptides

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Interaction of melittin with lipid membranes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The structure of melittin. II. Interpretation of the structure.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Interaction of a Lytic Polypeptide, Melittin, with Lipid Membrane Systems

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

Focusing of electric fields in the active site of Cu-Zn superoxide dismutase: effects of ionic strength and amino-acid modification

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The effect of synthetic polymers on the electrical and permeability properties of lipid membranes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299834

The structure of melittin. A 1H-NMR study in methanol

31 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977604-0

Study of vesicle leakage induced by melittin

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977604-0

Melittin binding to mixed phosphatidylglycerol/phosphatidylcholine membranes

7 January 2021

1 reference

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A combined X-ray and neutron diffraction study of selectively deuterated melittin in phospholipid bilayers: effect of pH

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977604-0

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

7 January 2021

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Restricted mobility of the sole tryptophan in membrane-bound melittin

7 January 2021

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Helical structure and orientation of melittin in dispersed phospholipid membranes from amide exchange analysis in situ

7 January 2021

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Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid crystal phase

7 January 2021

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Comparison of simple potential functions for simulating liquid water

7 January 2021

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Family of G protein alpha chains: amphipathic analysis and predicted structure of functional domains

7 January 2021

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

7 January 2021

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Leakage of internal markers from erythrocytes and lipid vesicles induced by melittin, gramicidin S and alamethicin: a comparative study

7 January 2021

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Lipid conformation in model membranes and biological membranes

7 January 2021

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Comparison of the conformation and orientation of alamethicin and melittin in lipid membranes

7 January 2021

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The orientation of melittin in lipid membranes. A polarized infrared spectroscopy study

7 January 2021

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Calculation of the electric potential in the active site cleft due to alpha-helix dipoles

7 January 2021

1 reference

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Fluorescence, CD, attenuated total reflectance (ATR) FTIR, and 13C NMR characterization of the structure and dynamics of synthetic melittin and melittin analogues in lipid environments

7 January 2021

1 reference

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The effect of sequence variations and structure on the cytolytic activity of melittin peptides

7 January 2021

1 reference

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Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer

7 January 2021

1 reference

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The structure of melittin. I. Structure determination and partial refinement

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9746504

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(98)77604-0

1 reference

5 July 2017

1 reference

5 July 2017

1 reference