Yeast 18S rRNA dimethylase Dim1p: a quality control mechanism in ribosome synthesis? (Q32075110)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528805%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

title

Yeast 18S rRNA dimethylase Dim1p: a quality control mechanism in ribosome synthesis? (English)

1 reference

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10 November 2019

0 references

1

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10 November 2019

David Tollervey

series ordinal

3

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10 November 2019

author name string

T Preiss

series ordinal

2

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10 November 2019

language of work or name

English

0 references

publication date

1 April 1998

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Molecular and Cellular Biology

10 November 2019

published in

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10 November 2019

volume

18

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10 November 2019

issue

4

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10 November 2019

page(s)

2360-2370

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Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

10 November 2019

cites work

1 reference

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Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

14 July 2018

1 reference

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Trans-acting factors in ribosome synthesis

14 July 2018

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RRP5 is required for formation of both 18S and 5.8S rRNA in yeast

14 July 2018

1 reference

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Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides

14 July 2018

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One-step PCR mediated strategy for the construction of conditionally expressed and epitope tagged yeast proteins

14 July 2018

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Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs

14 July 2018

1 reference

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Trans-acting factors in yeast pre-rRNA and pre-snoRNA processing.

14 July 2018

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Processing of pre-ribosomal RNA in Saccharomyces cerevisiae

14 July 2018

1 reference

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

14 July 2018

1 reference

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Yeast snR30 is a small nucleolar RNA required for 18S rRNA synthesis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine

14 July 2018

1 reference

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A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae

14 July 2018

1 reference

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A mutational analysis of the two motifs common to adenine methyltransferases.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

The DIM1 gene responsible for the conserved m6(2)Am6(2)A dimethylation in the 3'-terminal loop of 18 S rRNA is essential in yeast

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Cap-dependent and cap-independent translation by internal initiation of mRNAs in cell extracts prepared from Saccharomyces cerevisiae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

The 18S rRNA dimethylase Dim1p is required for pre-ribosomal RNA processing in yeast.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

The 5' end of yeast 5.8S rRNA is generated by exonucleases from an upstream cleavage site

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Studies on the function of two adjacent N6,N6-dimethyladenosines near the 3' end of 16S ribosomal RNA of Escherichia coli. IV. The effect of the methylgroups on ribosomal subunit interaction

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance

14 July 2018

1 reference

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Mechanism of kasugamycin resistance in Escherichia coli

14 July 2018

1 reference

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Change in methylation of 16S ribosomal RNA associated with mutation to kasugamycin resistance in Escherichia coli

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

RRP1, a Saccharomyces cerevisiae gene affecting rRNA processing and production of mature ribosomal subunits

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

In vitro synthesis of 16S ribosomal RNA containing single base changes and assembly into a functional 30S ribosome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Identification and characterization of a yeast nucleolar protein that is similar to a rat liver nucleolar protein

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Sequence of the D-aspartyl/L-isoaspartyl protein methyltransferase from human erythrocytes. Common sequence motifs for protein, DNA, RNA, and small molecule S-adenosylmethionine-dependent methyltransferases

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

14 July 2018

1 reference

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The numerous modified nucleotides in eukaryotic ribosomal RNA

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Site-specific mutation of the conserved m6(2)A m6(2)A residues of E. coli 16S ribosomal RNA. Effects on ribosome function and activity of the ksgA methyltransferase

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Cloning by function: an alternative approach for identifying yeast homologs of genes from other organisms

14 July 2018

1 reference

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In vitro mutagenesis and plasmid shuffling: from cloned gene to mutant yeast

14 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

The YDp plasmids: a uniform set of vectors bearing versatile gene disruption cassettes for Saccharomyces cerevisiae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

A family of low and high copy replicative, integrative and single-strandedS. cerevisiae/E. coli shuttle vectors

14 July 2018

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Improved method for high efficiency transformation of intact yeast cells

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

NSR1 is required for pre-rRNA processing and for the proper maintenance of steady-state levels of ribosomal subunits

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Secondary Methylation of Yeast Ribosomal Precursor RNA

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Studies on the function of two adjacent N6,N6-dimethyladenosines near the 3' end of 16 S ribosomal RNA of Escherichia coli. II. The effect of the absence of the methyl groups on initiation of protein biosynthesis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Phenotypic suppression of nonsense mutants in yeast by aminoglycoside antibiotics

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Phenotypic suppression and misreading in Saccharomyces cerevisiae

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Studies on ribosome structure and interactions near the m26A m26A sequence

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Variable regions V13 and V3 of Saccharomyces cerevisiae contain structural features essential for normal biogenesis and stability of 5.8S and 25S rRNA.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

A common function for mRNA 5' and 3' ends in translation initiation in yeast

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Kasugamycin resistant mutants of Bacillus stearothermophilus lacking the enzyme for the methylation of two adjacent adenosines in 16S ribosomal RNA.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=121492

Early and Late Methylations in HeLa Cell Ribosome Maturation

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9528805

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Increased translational fidelity caused by the antibiotic kasugamycin and ribosomal ambiguity in mutants harbouring the ksgA gene

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9528805

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Clustering of modified nucleotides at the functional center of bacterial ribosomal RNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9528805

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.18.4.2360

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528805%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9528805%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

PubMed publication ID

9528805

1 reference