Genomic organization and molecular analysis of virulent bacteriophage 2972 infecting an exopolysaccharide-producing Streptococcus thermophilus strain (Q33218352)

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English	Genomic organization and molecular analysis of virulent bacteriophage 2972 infecting an exopolysaccharide-producing Streptococcus thermophilus strain	scientific article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000821%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

Genomic organization and molecular analysis of virulent bacteriophage 2972 infecting an exopolysaccharide-producing Streptococcus thermophilus strain (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000821%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

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Streptococcus thermophilus

object named as

Streptococcus thermophilus

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4

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30 December 2019

Sylvain Moineau

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30 December 2019

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Céline Lévesque

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30 December 2019

Martin Duplessis

2

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30 December 2019

Jessica Labonté

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30 December 2019

Christophe Fremaux

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30 December 2019

Denise Tremblay

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30 December 2019

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1 July 2005

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30 December 2019

Applied and Environmental Microbiology

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30 December 2019

71

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30 December 2019

7

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30 December 2019

4057-4068

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30 December 2019

Evolution of a Lytic Bacteriophage via DNA Acquisition from the Lactococcus lactis Chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Genetic organization of the psbAD region in phages infecting marine Synechococcus strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

The interaction of phage and biofilms

1 reference

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21 June 2018

Distribution, sequence homology, and homing of group I introns among T-even-like bacteriophages: evidence for recent transfer of old introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Antisense RNA targeting of primase interferes with bacteriophage replication in Streptococcus thermophilus

1 reference

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21 June 2018

Genomic organization and molecular characterization of SM1, a temperate bacteriophage of Streptococcus mitis.

1 reference

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21 June 2018

Biochemistry, genetics, and applications of exopolysaccharide production in Streptococcus thermophilus: a review.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Genome organization and molecular analysis of the temperate bacteriophage MM1 of Streptococcus pneumoniae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

DNA-binding activity of the Streptococcus thermophilus phage Sfi21 repressor

1 reference

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21 June 2018

The dilemma of phage taxonomy illustrated by comparative genomics of Sfi21-like Siphoviridae in lactic acid bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Comparative genomics of phages and prophages in lactic acid bacteria

1 reference

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21 June 2018

Effect of exopolysaccharides on phage-host interactions in Lactococcus lactis

1 reference

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21 June 2018

Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches

1 reference

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21 June 2018

The Phage Proteomic Tree: a genome-based taxonomy for phage

1 reference

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21 June 2018

Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence

1 reference

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21 June 2018

Complete genomic sequence of bacteriophage ul36: demonstration of phage heterogeneity within the P335 quasi-species of lactococcal phages.

1 reference

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21 June 2018

Expression of antisense RNA targeted against Streptococcus thermophilus bacteriophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Phages of dairy bacteria

1 reference

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21 June 2018

Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Advances in the genetics of thermophilic lactic acid bacteria

1 reference

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21 June 2018

Holins: the protein clocks of bacteriophage infections

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21 June 2018

The role of probiotic bacteria in cancer prevention

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21 June 2018

Homologous recombination between a lactococcal bacteriophage and the chromosome of its host strain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Multiplex PCR for detection and identification of lactococcal bacteriophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Genetic analysis of chromosomal regions of Lactococcus lactis acquired by recombinant lytic phages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Widespread distribution of a group I intron and its three deletion derivatives in the lysin gene of Streptococcus thermophilus bacteriophages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Identification of four loci isolated from two Streptococcus thermophilus phage genomes responsible for mediating bacteriophage resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Similarly organized lysogeny modules in temperate Siphoviridae from low GC content gram-positive bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Applications of phage resistance in lactic acid bacteria.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Comparative genomics of Streptococcus thermophilus phage species supports a modular evolution theory

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

The genetic relationship between virulent and temperate Streptococcus thermophilus bacteriophages: whole genome comparison of cos-site phages Sfi19 and Sfi21.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

The groESL chaperone operon of Lactobacillus johnsonii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Unexpected abundance of self-splicing introns in the genome of bacteriophage Twort: introns in multiple genes, a single gene with three introns, and exon skipping by group I ribozymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Complete genomic sequence of the lytic bacteriophage DT1 of Streptococcus thermophilus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Tailed bacteriophages: the order caudovirales

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Biofilm susceptibility to bacteriophage attack: the role of phage-borne polysaccharide depolymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

The structural gene module in Streptococcus thermophilus bacteriophage phi Sfi11 shows a hierarchy of relatedness to Siphoviridae from a wide range of bacterial hosts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPbeta

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Sequence analysis and characterization of phi O1205, a temperate bacteriophage infecting Streptococcus thermophilus CNRZ1205.

1 reference

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21 June 2018

Structural characterization of the exocellular polysaccharides produced by Streptococcus thermophilus SFi39 and SFi12

1 reference

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21 June 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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21 June 2018

Two groups of bacteriophages infecting Streptococcus thermophilus can be distinguished on the basis of mode of packaging and genetic determinants for major structural proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Characterization of the lysogeny DNA module from the temperate Streptococcus thermophilus bacteriophage phi Sfi21.

1 reference

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21 June 2018

Site-specific spontaneous deletions in three genome regions of a temperate Streptococcus thermophilus phage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Introns as mobile genetic elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

An intron in the thymidylate synthase gene of Bacillus bacteriophage beta 22: evidence for independent evolution of a gene, its group I intron, and the intron open reading frame

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Detection and classification of Streptococcus thermophilus bacteriophages isolated from industrial milk fermentation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Representation of the secondary and tertiary structure of group I introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

A comprehensive set of sequence analysis programs for the VAX

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Structural conventions for group I introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Structural conservation among three homologous introns of bacteriophage T4 and the group I introns of eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Self-splicing of group I introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

A self-splicing group I intron in the DNA polymerase gene of Bacillus subtilis bacteriophage SPO1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

21 June 2018

Identification of a genetic determinant responsible for host specificity in Streptococcus thermophilus bacteriophages.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

31 October 2018

Exopolysaccharide-producing strains of thermophilic lactic acid bacteria cluster into groups according to their EPS structure.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

31 October 2018

Bacteriophage collagen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

31 October 2018

A group I intron in the terminase gene of Lactobacillus delbrueckii subsp. lactis phage LL-H.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1169050

31 October 2018

Supercoiled protein motifs: the collagen triple-helix and the alpha-helical coiled coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/16000821

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A short noncoding viral DNA element showing characteristics of a replication origin confers bacteriophage resistance to Streptococcus thermophilus

1 reference

https://pubmed.ncbi.nlm.nih.gov/16000821

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The site-specific integration system of the temperate Streptococcus thermophilus bacteriophage phiSfi21

1 reference

https://pubmed.ncbi.nlm.nih.gov/16000821

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.71.7.4057-4068.2005

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000821%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

PMC publication ID

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000821%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16000821%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

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