Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria (Q33232056)

24 July 2017

Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria (English)

1 reference

24 July 2017

0 references

8

Yvan Moënne-Loccoz

1 reference

24 July 2017

Hervé Sanguin

1

0 references

Xavier Nesme

Xavier Nesme

9

0 references

Timothy M. Vogel

Timothy M Vogel

7

0 references

Arnaud Dechesne

Arnaud Dechesne

4

0 references

Pascal Simonet

5

Pascal Simonet

1 reference

24 July 2017

Aude Herrera

2

1 reference

24 July 2017

Christine Oger-Desfeux

3

1 reference

24 July 2017

Elisabeth Navarro

6

1 reference

24 July 2017

Geneviève L Grundmann

10

1 reference

24 July 2017

1 February 2006

1 reference

Environmental Microbiology

24 July 2017

1 reference

24 July 2017

8

1 reference

24 July 2017

2

1 reference

24 July 2017

289-307

1 reference

The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function

24 July 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Portable system for microbial sample preparation and oligonucleotide microarray analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Bacterial rhodopsin: evidence for a new type of phototrophy in the sea

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Filamentous Chloroflexi (green non-sulfur bacteria) are abundant in wastewater treatment processes with biological nutrient removal

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Oligonucleotide microarrays in microbial diagnostics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Development and validation of a diagnostic microbial microarray for methanotrophs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Radioisotopic, culture-based, and oligonucleotide microchip analyses of thermophilic microbial communities in a continental high-temperature petroleum reservoir

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Predicting DNA duplex stability from the base sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Denitrifying bacteria in bulk and maize-rhizospheric soil: diversity and N2O-reducing abilities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Quantitative detection of microbial genes by using DNA microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Molecular community analysis of microbial diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Manufacturing DNA microarrays of high spot homogeneity and reduced background signal

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Empirical and theoretical bacterial diversity in four Arizona soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Comparative 16S rDNA and 16S rRNA sequence analysis indicates that Actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity on Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Adaptation to nickel spiking of bacterial communities in neocaledonian soils.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Terminal restriction pattern analysis of 16S rRNA genes for the characterization of bacterial communities of activated sludge.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

DNA microarrays for expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Fingerprinting diazotroph communities in the Chesapeake Bay by using a DNA macroarray

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Fingerprinting closely related xanthomonas pathovars with random nonamer oligonucleotide microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Parallel characterization of anaerobic toluene- and ethylbenzene-degrading microbial consortia by PCR-denaturing gradient gel electrophoresis, RNA-DNA membrane hybridization, and DNA microarray technology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Analysis of the replicon region and identification of an rRNA operon on pBM400 of Bacillus megaterium QM B1551.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Application of rRNA-targeted oligonucleotide probes in biotechnology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Optimization of an oligonucleotide microchip for microbial identification studies: a non-equilibrium dissociation approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

ARB: a software environment for sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Novel tellurite-amended media and specific chromosomal and Ti plasmid probes for direct analysis of soil populations of Agrobacterium biovars 1 and 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

A mathematical method for determining genome divergence and species delineation using AFLP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

New degenerate Cytophaga-Flexibacter-Bacteroides-specific 16S ribosomal DNA-targeted oligonucleotide probes reveal high bacterial diversity in River Taff epilithon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

A molecular view of microbial diversity and the biosphere

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

WWW-query: an on-line retrieval system for biological sequence banks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Nitrogenase reductase: A functional multigene family in Rhizobium phaseoli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Reduction of autofluorescence on DNA microarrays and slide surfaces by treatment with sodium borohydride.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Optimization of oligonucleotide-based DNA microarrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Rhizobium etli maize populations and their competitiveness for root colonization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Parallel human genome analysis: microarray-based expression monitoring of 1000 genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Bacterial diversity in maize rhizospheres: conclusions on the use of genetic profiles based on PCR-amplified partial small subunit rRNA genes in ecological studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Molecular interactions on microarrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

The EMBL Nucleotide Sequence Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Optimization of diagnostic microarray for application in analysing landfill methanotroph communities under different plant covers

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Direct conjugal transfers of Ti plasmid to soil microflora.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Molecular techniques for determining microbial diversity and community structure in natural environments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Microbial diversity and function in soil: from genes to ecosystems

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

16S rRNA sequences reveal numerous uncultured microorganisms in a natural community

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Bacterial populations colonizing and degrading rice straw in anoxic paddy soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Sequence-specific identification of 18 pathogenic microorganisms using microarray technology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Phylogenetic structure of the prokaryotic domain: The primary kingdoms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

Assessment of 35mer amino-modified oligonucleotide based microarray with bacterial samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2005.00895.X

10.1111/J.1462-2920.2005.00895.X

21 January 2018

Identifiers

DOI

1 reference

24 July 2017

1 reference