SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology (Q33245905)

24 July 2017

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title

SBEAMS-Microarray: database software supporting genomic expression analyses for systems biology (English)

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24 July 2017

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2

Eric W Deutsch

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24 July 2017

Bruz Marzolf

1

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24 July 2017

Patrick Moss

3

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24 July 2017

David Campbell

4

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24 July 2017

Michael H Johnson

5

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24 July 2017

Timothy Galitski

6

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24 July 2017

publication date

6 June 2006

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24 July 2017

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24 July 2017

volume

7

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24 July 2017

page(s)

286

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Creative Commons Attribution 2.0 Generic

24 July 2017

copyright license

start time

6 June 2006

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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April 2022 Public Data File from Crossref

describes a project that uses

SQL

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC1524999

based on heuristic

inferred from PubMed Central ID database lookup

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping

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Tools enabling the elucidation of molecular pathways active in human disease: application to Hepatitis C virus infection

21 June 2018

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MARS: microarray analysis, retrieval, and storage system

21 June 2018

1 reference

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The Stanford Microarray Database accommodates additional microarray platforms and data formats

21 June 2018

1 reference

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GECKO: a complete large-scale gene expression analysis platform

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1524999

Molecular networks in model systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1524999

Bioconductor: open software development for computational biology and bioinformatics

21 June 2018

1 reference

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Control of yeast filamentous-form growth by modules in an integrated molecular network

21 June 2018

1 reference

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Cytoscape: a software environment for integrated models of biomolecular interaction networks

21 June 2018

1 reference

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The Longhorn Array Database (LAD): an open-source, MIAME compliant implementation of the Stanford Microarray Database (SMD)

21 June 2018

1 reference

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

21 June 2018

1 reference

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TM4: a free, open-source system for microarray data management and analysis

21 June 2018

1 reference

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

21 June 2018

1 reference

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ArrayExpress--a public repository for microarray gene expression data at the EBI

21 June 2018

1 reference

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A new non-linear normalization method for reducing variability in DNA microarray experiments

21 June 2018

1 reference

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Design and implementation of microarray gene expression markup language (MAGE-ML)

21 June 2018

1 reference

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BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data.

21 June 2018

1 reference

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Variance stabilization applied to microarray data calibration and to the quantification of differential expression

21 June 2018

1 reference

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Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

21 June 2018

1 reference

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A new approach to decoding life: systems biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1524999

Significance analysis of microarrays applied to the ionizing radiation response

21 June 2018

1 reference

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Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1524999

Robust estimators for expression analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1524999

31 October 2018

Identifiers

DOI

10.1186/1471-2105-7-286

1 reference

journals/bmcbi/MarzolfDMCJG06

24 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

24 July 2017

1 reference