Identifying an interaction site between MutH and the C-terminal domain of MutL by crosslinking, affinity purification, chemical coding and mass spectrometry (Q33246717)

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English	Identifying an interaction site between MutH and the C-terminal domain of MutL by crosslinking, affinity purification, chemical coding and mass spectrometry	scientific article

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scholarly article

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Europe PubMed Central

24 July 2017

Identifying an interaction site between MutH and the C-terminal domain of MutL by crosslinking, affinity purification, chemical coding and mass spectrometry (English)

1 reference

Europe PubMed Central

24 July 2017

object named as

Jan Kosinski

2

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4

object named as

Laura Manelyte

1 reference

Europe PubMed Central

24 July 2017

Bernhard Spengler

8

object named as

Bernhard Spengler

1 reference

Europe PubMed Central

24 July 2017

author name string

Robert Ahrends

1

1 reference

Europe PubMed Central

24 July 2017

Dieter Kirsch

3

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Europe PubMed Central

24 July 2017

Luis Giron-Monzon

5

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Europe PubMed Central

24 July 2017

Lars Hummerich

6

1 reference

Europe PubMed Central

24 July 2017

Oliver Schulz

7

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Europe PubMed Central

24 July 2017

Peter Friedhoff

9

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Europe PubMed Central

24 July 2017

language of work or name

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publication date

13 June 2006

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Europe PubMed Central

24 July 2017

Nucleic Acids Research

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Europe PubMed Central

24 July 2017

34

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Europe PubMed Central

24 July 2017

10

1 reference

Europe PubMed Central

24 July 2017

3169-3180

1 reference

Europe PubMed Central

24 July 2017

The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide

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14 July 2018

Mapping protein interfaces by a trifunctional cross-linker combined with MALDI-TOF and ESI-FTICR mass spectrometry

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Identification and mapping of protein-protein interactions by a combination of cross-linking, cleavage, and proteomics

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ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures

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14 July 2018

DNA mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

14 July 2018

Mass spectrometric detection of biotinylated peptides captured by avidin functional affinity electrophoresis

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The biotin-streptavidin interaction can be reversibly broken using water at elevated temperatures

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14 July 2018

Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair

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New chemical crosslinking methods for the identification of transient protein-protein interactions with multiprotein complexes.

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Formation of a DNA mismatch repair complex mediated by ATP.

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DNA mismatch repair: molecular mechanisms and biological function

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Chemical cross-linking and mass spectrometry for protein structural modeling.

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A modular cross-linking approach for exploring protein interactions

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14 July 2018

Site-specific protein modification to identify the MutL interface of MutH.

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ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information

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Haemophilus influenzae and Vibrio cholerae genes for mutH are able to fully complement a mutH defect in Escherichia coli.

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Mutational analysis of the MutH protein from Escherichia coli

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14 July 2018

High throughput protein fold identification by using experimental constraints derived from intramolecular cross-links and mass spectrometry.

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A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

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Using photolabile ligands in drug discovery and development.

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Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

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14 July 2018

Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair

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14 July 2018

Peptide and protein identification by matrix-assisted laser desorption ionization (MALDI) and MALDI-post-source decay time-of-flight mass spectrometry

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14 July 2018

An improved PCR-mutagenesis strategy for two-site mutagenesis or sequence swapping between related genes

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Structural basis for MutH activation in E.coli mismatch repair and relationship of MutH to restriction endonucleases

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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14 July 2018

Coupling of MALDI-TOF mass analysis to the separation of biotinylated peptides by magnetic streptavidin beads

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14 July 2018

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

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14 July 2018

Single-step purifications of His6-MutH, His6-MutL and His6-MutS repair proteins of escherichia coli K-12.

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How to measure and predict the molar absorption coefficient of a protein

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Mechanisms and biological effects of mismatch repair

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14 July 2018

The DNA binding activity of MutL is required for methyl-directed mismatch repair in Escherichia coli

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31 October 2018

MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage

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Analysis of the quaternary structure of the MutL C-terminal domain

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Mapping protein-protein interactions between MutL and MutH by cross-linking

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1483222

31 October 2018

Absolute quantification of specific proteins in complex mixtures using visible isotope-coded affinity tags

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Mass spectrometric detection of affinity purified crosslinked peptides.

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Element-coded affinity tags for peptides and proteins

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31 October 2018

Hydrolytically Deficient MutS E694A Is Defective in the MutL-dependent Activation of MutH and in the Mismatch-dependent Assembly of the MutS · MutL · Heteroduplex Complex

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The coordinated functions of the E. coli MutS and MutL proteins in mismatch repair

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In vitro and in vivo studies of MutS, MutL and MutH mutants: correlation of mismatch repair and DNA recombination.

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Interaction of Escherichia coli MutS and MutL at a DNA mismatch

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inferred from PubMed ID database lookup

Substituted-cysteine accessibility method

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https://pubmed.ncbi.nlm.nih.gov/16772401

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inferred from PubMed ID database lookup

The Escherichia coli MutL protein physically interacts with MutH and stimulates the MutH-associated endonuclease activity

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping protein-protein interactions by bioinformatics and cross-linking

1 reference

https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discrimination and versatility in mismatch repair

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https://pubmed.ncbi.nlm.nih.gov/16772401

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKL407

1 reference

Europe PubMed Central

24 July 2017

release_poztimgpprdxvbg5ntbh7epi34

1 reference

https://api.fatcat.wiki/v0/release/poztimgpprdxvbg5ntbh7epi34

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

24 July 2017

1 reference

Europe PubMed Central

24 July 2017

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