SyMAP: A system for discovering and viewing syntenic regions of FPC maps (Q33256256)

24 July 2017

title

SyMAP: A system for discovering and viewing syntenic regions of FPC maps (English)

1 reference

24 July 2017

Carol Soderlund

1

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24 July 2017

William Nelson

series ordinal

2

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24 July 2017

Austin Shoemaker

series ordinal

3

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24 July 2017

Andrew Paterson

series ordinal

4

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24 July 2017

publication date

1 September 2006

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24 July 2017

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24 July 2017

volume

16

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24 July 2017

issue

9

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24 July 2017

page(s)

1159-1168

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The oryza map alignment project: the golden path to unlocking the genetic potential of wild rice species

24 July 2017

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21 June 2018

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Whole-genome validation of high-information-content fingerprinting

21 June 2018

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Comparative physical mapping links conservation of microsynteny to chromosome structure and recombination in grasses

21 June 2018

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21 June 2018

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21 June 2018

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Close split of sorghum and maize genome progenitors

21 June 2018

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Sequence composition and genome organization of maize.

21 June 2018

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Ancient polyploidization predating divergence of the cereals, and its consequences for comparative genomics

21 June 2018

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21 June 2018

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A High-Density Genetic Recombination Map of Sequence-Tagged Sites for Sorghum, as a Framework for Comparative Structural and Evolutionary Genomics of Tropical Grains and Grasses

21 June 2018

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Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

21 June 2018

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High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis

21 June 2018

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LineUp: statistical detection of chromosomal homology with application to plant comparative genomics

21 June 2018

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Human-mouse alignments with BLASTZ

21 June 2018

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Genome rearrangements in mammalian evolution: lessons from human and mouse genomes

21 June 2018

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21 June 2018

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Gramene, a tool for grass genomics

21 June 2018

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The automatic detection of homologous regions (ADHoRe) and its application to microcolinearity between Arabidopsis and rice

21 June 2018

1 reference

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A physical map of the mouse genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

PatternHunter: faster and more sensitive homology search

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

BLAT—The BLAST-Like Alignment Tool

21 June 2018

1 reference

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Five-color-based high-information-content fingerprinting of bacterial artificial chromosome clones using type IIS restriction endonucleases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

Contigs built with fingerprints, markers, and FPC V4.7.

21 June 2018

1 reference

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High throughput fingerprint analysis of large-insert clones

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

FPC: a system for building contigs from restriction fingerprinted clones

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

DAGchainer: a tool for mining segmental genome duplications and synteny

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

Fast identification and statistical evaluation of segmental homologies in comparative maps.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1557773

31 October 2018

Identifiers

DOI

10.1101/GR.5396706

1 reference

24 July 2017

1 reference

24 July 2017

1 reference