cPath: open source software for collecting, storing, and querying biological pathways (Q33263441)

24 July 2017

1 reference

title

cPath: open source software for collecting, storing, and querying biological pathways (English)

1 reference

24 July 2017

0 references

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4

Chris Sander

1 reference

24 July 2017

Gary D Bader

2

0 references

author name string

Ethan G Cerami

series ordinal

1

1 reference

PubMed ID

17101041

24 July 2017

Benjamin E Gross

series ordinal

3

1 reference

24 July 2017

13 November 2006

1 reference

24 July 2017

1 reference

24 July 2017

7

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24 July 2017

497

1 reference

Creative Commons Attribution 2.0 Generic

24 July 2017

start time

13 November 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

describes a project that uses

Cytoscape

object named as

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-7-497

0 references

cites work

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1 reference

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PIANA: protein interactions and network analysis

21 June 2018

1 reference

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21 June 2018

1 reference

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21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Pathguide: a pathway resource list

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

From genomics to chemical genomics: new developments in KEGG

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Minimum information requested in the annotation of biochemical models (MIRIAM)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

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21 June 2018

1 reference

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Pathway information for systems biology

21 June 2018

1 reference

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Atlas - a data warehouse for integrative bioinformatics

21 June 2018

1 reference

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Reactome: a knowledgebase of biological pathways

21 June 2018

1 reference

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The International Protein Index: an integrated database for proteomics experiments

21 June 2018

1 reference

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21 June 2018

1 reference

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CellML: its future, present and past

21 June 2018

1 reference

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AliasServer: a web server to handle multiple aliases used to refer to proteins

21 June 2018

1 reference

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The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

21 June 2018

1 reference

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IntAct: an open source molecular interaction database

21 June 2018

1 reference

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The Database of Interacting Proteins: 2004 update

21 June 2018

1 reference

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Cytoscape: a software environment for integrated models of biomolecular interaction networks

21 June 2018

1 reference

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Development of human protein reference database as an initial platform for approaching systems biology in humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Integrating biological databases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Modelling the molecular circuitry of cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

MINT: a Molecular INTeraction database

21 June 2018

1 reference

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Systems biology: a brief overview

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

The EBI SRS server--recent developments

21 June 2018

1 reference

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A new approach to decoding life: systems biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Genomic medicine and the future of health care

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

21 June 2018

The Hallmarks of Cancer

1 reference

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DIP: the database of interacting proteins

21 June 2018

1 reference

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KEGG: Kyoto Encyclopedia of Genes and Genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Database links are a foundation for interoperability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

EcoCyc: an encyclopedia of Escherichia coli genes and metabolism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Quantitative information management for the biochemical computation of cellular networks.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1660554

Creating a bioinformatics nation

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17101041

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Systems biology: understanding cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17101041

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Coming soon: a global grid for cancer research

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17101041

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Napster case spills into biotech sector

1 reference

27 May 2022

https://opencitations.net/index/coci/api/v1/references/10.1186/1471-2105-7-497

Identifiers

DOI

10.1186/1471-2105-7-497

1 reference

journals/bmcbi/CeramiBGS06

24 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

24 July 2017

1 reference

PubMed ID

17101041