Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array. (Q33267755)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17192196%20AND%20SRC:MED&resulttype=core&format=json

23 December 2019

title

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17192196%20AND%20SRC:MED&resulttype=core&format=json

alternative mRNA splicing, via spliceosome

23 December 2019

main subject

1 reference

1 reference

whole genome sequencing

1 reference

2

1 reference

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23 December 2019

13

Yaron Turpaz

1 reference

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23 December 2019

author name string

Paul J Gardina

1

1 reference

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23 December 2019

Brian Shimada

3

1 reference

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23 December 2019

Michelle K Staples

4

1 reference

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23 December 2019

Qing Yang

5

1 reference

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23 December 2019

James Veitch

6

1 reference

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23 December 2019

Anthony Schweitzer

7

1 reference

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23 December 2019

Tarif Awad

8

1 reference

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23 December 2019

Charles Sugnet

9

1 reference

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23 December 2019

Suzanne Dee

10

1 reference

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23 December 2019

Christopher Davies

11

1 reference

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23 December 2019

Alan Williams

12

1 reference

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23 December 2019

language of work or name

English

0 references

publication date

27 December 2006

1 reference

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23 December 2019

1 reference

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23 December 2019

volume

7

1 reference

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23 December 2019

page(s)

325

1 reference

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Creative Commons Attribution 2.0 Generic

23 December 2019

copyright license

start time

1 December 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-7-325

0 references

cites work

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Verification of predicted alternatively spliced Wnt genes reveals two new splice variants (CTNNB1 and LRP5) and altered Axin-1 expression during tumour progression

21 June 2018

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Unbalanced alternative splicing and its significance in cancer

21 June 2018

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An essential role of alternative splicing of c-myc suppressor FUSE-binding protein-interacting repressor in carcinogenesis

21 June 2018

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Balancing cell adhesion and Wnt signaling, the key role of beta-catenin

21 June 2018

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Dominant expression of 85-kDa form of cortactin in colorectal cancer.

21 June 2018

1 reference

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Binding and regulation of hypoxia-inducible factor-1 by the inhibitory PAS proteins

21 June 2018

1 reference

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Evidence that public database records for many cancer-associated genes reflect a splice form found in tumors and lack normal splice forms

21 June 2018

1 reference

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Regulation of microfilament organization by Kaposi sarcoma-associated herpes virus-cyclin.CDK6 phosphorylation of caldesmon

21 June 2018

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Nova regulates brain-specific splicing to shape the synapse

21 June 2018

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Candidates for tumor-specific alternative splicing

21 June 2018

1 reference

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Structural dynamics of alpha-actinin-vinculin interactions

21 June 2018

1 reference

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High-throughput alternative splicing quantification by primer extension and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

21 June 2018

1 reference

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Silencing of the Tropomyosin-1 gene by DNA methylation alters tumor suppressor function of TGF-beta

21 June 2018

1 reference

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Insulinlike growth factor-I-mediated migration and invasion of human colon carcinoma cells requires activation of c-Met and urokinase plasminogen activator receptor

21 June 2018

1 reference

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Identification of human exons overexpressed in tumors through the use of genome and expressed sequence data

21 June 2018

1 reference

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CD98hc (SLC3A2) mediates integrin signaling.

21 June 2018

1 reference

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VEGF165b, an inhibitory vascular endothelial growth factor splice variant: mechanism of action, in vivo effect on angiogenesis and endogenous protein expression

21 June 2018

1 reference

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Overexpression of cortactin is involved in motility and metastasis of hepatocellular carcinoma.

21 June 2018

1 reference

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Direct test of potential roles of EIIIA and EIIIB alternatively spliced segments of fibronectin in physiological and tumor angiogenesis

21 June 2018

1 reference

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Serum response factor is alternatively spliced in human colon cancer

21 June 2018

1 reference

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Caldesmon mutant defective in Ca(2+)-calmodulin binding interferes with assembly of stress fibers and affects cell morphology, growth and motility

21 June 2018

1 reference

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Alternative splice variant of actinin-4 in small cell lung cancer

21 June 2018

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Alpha-actinin revisited: a fresh look at an old player

21 June 2018

1 reference

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Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment

21 June 2018

1 reference

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Alternative splicing of the human MUC2 gene

21 June 2018

1 reference

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Alternative splicing of Rac1 generates Rac1b, a self-activating GTPase

21 June 2018

1 reference

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Discovery of novel splice forms and functional analysis of cancer-specific alternative splicing in human expressed sequences

21 June 2018

1 reference

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Mechanisms of alternative pre-messenger RNA splicing

21 June 2018

1 reference

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Pre-mRNA splicing and human disease

21 June 2018

1 reference

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Isolation and sequencing of a novel tropomyosin isoform preferentially associated with colon cancer

21 June 2018

1 reference

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Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

21 June 2018

1 reference

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Rho GTPases in transformation and metastasis.

21 June 2018

1 reference

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Peptide YY and cancer: current findings and potential clinical applications

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Alternative mRNA splicing in colon cancer causes loss of expression of neural cell adhesion molecule

21 June 2018

1 reference

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Integrin laminin receptors and breast carcinoma progression.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Towards a mechanistic understanding of tumor invasion--lessons from the alpha6beta 4 integrin

21 June 2018

1 reference

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Differential expression of aquaporin 8 in human colonic epithelial cells and colorectal tumors

21 June 2018

1 reference

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Genomic analysis of metastasis reveals an essential role for RhoC

21 June 2018

1 reference

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CD44 cell adhesion molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Characterization of MLH1 and MSH2 alternative splicing and its relevance to molecular testing of colorectal cancer susceptibility

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

A transformation-associated complex involving tyrosine kinase signal adapter proteins and caldesmon links v-erbB signaling to actin stress fiber disassembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

A splicing variant of the RON transcript induces constitutive tyrosine kinase activity and an invasive phenotype

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

A novel structural variant of the human beta 4 integrin cDNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Multiple tropomyosin polypeptides in chicken embryo fibroblasts: differential repression of transcription by Rous sarcoma virus transformation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Detection and measurement of alternative splicing using splicing-sensitive microarrays.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

CD98hc (SLC3A2) interaction with beta 1 integrins is required for transformation

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Loss of expression of tropomyosin-1, a novel class II tumor suppressor that induces anoikis, in primary breast tumors

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Alternative splicing of the actin binding domain of human cortactin affects cell migration

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Activation of c-Met in colorectal carcinoma cells leads to constitutive association of tyrosine-phosphorylated beta-catenin

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Computational analysis and experimental validation of tumor-associated alternative RNA splicing in human cancer.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Immunoelectron study of somatostatin, gastrin and glucagon in human colorectal adenocarcinomas and liver metastases.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Malignant transformation of NIH3T3 cells by overexpression of early lymphocyte activation antigen CD98.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Lack of tropomyosin correlates with the absence of stress fibers in transformed rat kidney cells

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1769375

Tissue-specific expression pattern of vascular endothelial growth factor isoforms in the malignant transformation of lung and colon

31 October 2018

1 reference

12 December 2020

Vascular endothelial growth factor is up-regulated in the early pre-malignant stage of colorectal tumour progression

1 reference

12 December 2020

Alternative splicing of CD44 pre-mRNA in human colorectal tumors

1 reference

12 December 2020

Characterization of persistent artifacts resulting from RT-PCR of alternatively spliced mRNAs

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-7-325

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17192196%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

23 December 2019

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-7-325

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17192196%20AND%20SRC:MED&resulttype=core&format=json

23 December 2019

1 reference