Increased nucleotide diversity with transient Y linkage in Drosophila americana (Q33268284)

24 July 2017

Increased nucleotide diversity with transient Y linkage in Drosophila americana (English)

1 reference

24 July 2017

Drosophila americana

1 reference

1 reference

Bryant F McAllister

1

1 reference

PubMed ID

17205116

24 July 2017

Amy L Evans

series ordinal

2

1 reference

PubMed ID

17205116

24 July 2017

language of work or name

English

0 references

publication date

27 December 2006

1 reference

24 July 2017

1 reference

24 July 2017

1

1 reference

24 July 2017

e112

1 reference

Creative Commons Attribution 4.0 International

24 July 2017

start time

27 December 2006

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Balancing selection and its effects on sequences in nearby genome regions

1 reference

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Steps in the evolution of heteromorphic sex chromosomes

21 June 2018

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Chicken W: a genetically uniform chromosome in a highly variable genome

21 June 2018

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Nucleotide variation and recombination along the fourth chromosome in Drosophila simulans

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Distinguishing the hitchhiking and background selection models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Sequence differentiation associated with an inversion on the neo-X chromosome of Drosophila americana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

DnaSP, DNA polymorphism analyses by the coalescent and other methods

21 June 2018

1 reference

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Hitchhiking mapping: a population-based fine-mapping strategy for adaptive mutations in Drosophilamelanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The effects of multilocus balancing selection on neutral variability.

21 June 2018

1 reference

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A microsatellite-based multilocus screen for the identification of local selective sweeps.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Patterns of genetic variation at a chromosome 4 locus of Drosophila melanogaster and D. simulans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Single nucleotide polymorphisms and recombination rate in humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Species and recombination effects on DNA variability in the tomato genus.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Evidence for selection at the fused1 locus of Drosophila americana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The degeneration of Y chromosomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Joint effects of genetic hitchhiking and background selection on neutral variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Hitchhiking under positive Darwinian selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

PipMaker--a web server for aligning two genomic DNA sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Neutral evolution of the sex-determining gene transformer in Drosophila

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Lack of nucleotide polymorphism in the Y-linked sperm flagellar dynein gene Dhc-Yh3 of Drosophila melanogaster and D. simulans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Reduced sequence variability on the Neo-Y chromosome of Drosophila americana americana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Overview of QTL mapping software and introduction to map manager QT.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Male fitness increases when females are eliminated from gene pool: implications for the Y chromosome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Measures of divergence between populations and the effect of forces that reduce variability.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

A test of the background selection hypothesis based on nucleotide data from Drosophila ananassae.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

A framework physical map of Drosophila virilis based on P1 clones: applications in genome evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Lack of degeneration of loci on the neo-Y chromosome of Drosophila americana americana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Deleterious background selection with recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Molecular phylogeny and genome evolution in the Drosophila virilis species group: duplications of the alcohol dehydrogenase gene.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Sequence evolution of the Gpdh gene in the Drosophila virilis species group

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

A combined molecular and cytogenetic approach to genome evolution in Drosophila using large-fragment DNA cloning.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Statistical tests of neutrality of mutations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The effect of deleterious mutations on neutral molecular variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Analysis of a genetic hitchhiking model, and its application to DNA polymorphism data from Drosophila melanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Evolutionary relationship of DNA sequences in finite populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Gene Flow and Population Differentiation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The evolutionary advantage of recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The hitch-hiking effect of a favourable gene

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

21 June 2018

12 December 2020

Genetic hitchhiking and the evolution of reduced genetic activity of the Y sex chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The coalescent process in models with selection and recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

The effect of change in population size on DNA polymorphism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Inferring the evolutionary histories of the Adh and Adh-dup loci in Drosophila melanogaster from patterns of polymorphism and divergence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Sexually antagonistic genes: experimental evidence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

A statistical test for detecting geographic subdivision

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Selection at linked sites in the partial selfer Caenorhabditis elegans.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Nucleotide variation along the Drosophila melanogaster fourth chromosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Chromosomal and allelic variation in Drosophila americana: selective maintenance of a chromosomal cline.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Patterns of microsatellite variation through a transition zone of a chromosomal cline in Drosophila americana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Adaptive loss of an old duplicated gene during incipient speciation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

The X chromosome is a hot spot for sexually antagonistic fitness variation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Contrasting patterns of molecular evolution of the genes on the new and old sex chromosomes of Drosophila miranda.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Reduced adaptation of a non-recombining neo-Y chromosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Evidence that positive selection drives Y-chromosome degeneration in Drosophila miranda.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

Gene flow and the limits to natural selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

SEX CHROMOSOMES AND THE EVOLUTION OF SEXUAL DIMORPHISM.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Structured coalescent processes on different time scales.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1762432

Low variability in a Y-linked plant gene and its implications for Y-chromosome evolution

31 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0000112

The effect of linkage on limits to artificial selection

21 January 2018

1 reference

12 December 2020

Background selection and patterns of genetic diversity in Drosophila melanogaster

1 reference

12 December 2020

Selective trade-offs and sex-chromosome evolution in Silene latifolia

1 reference

12 December 2020

Estimating the recombination parameter of a finite population model without selection

1 reference

12 December 2020

Low Levels of Nucleotide Diversity in Mammalian Y Chromosomes

1 reference

12 December 2020

DNA Diversity in Sex-Linked and Autosomal Genes of the Plant Species Silene latifolia and Silene dioica

1 reference

12 December 2020

Advanced statistics: bootstrapping confidence intervals for statistics with "difficult" distributions

1 reference

12 December 2020

The effect of recombination on background selection

1 reference

12 December 2020

THE ACCUMULATION OF SEXUALLY ANTAGONISTIC GENES AS A SELECTIVE AGENT PROMOTING THE EVOLUTION OF REDUCED RECOMBINATION BETWEEN PRIMITIVE SEX CHROMOSOMES

1 reference

12 December 2020

Extending the coalescent to multilocus systems: the case of balancing selection

1 reference

12 December 2020

Reduced levels of microsatellite variability on the neo-Y chromosome of Drosophila miranda

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0000112

Identifiers

DOI

1 reference

24 July 2017

0 references

1 reference

24 July 2017

1 reference

PubMed ID

17205116