H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state (Q33279444)

25 July 2017

H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state (English)

1 reference

posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery

25 July 2017

1 reference

Gene Ontology release 2020-05-02

1 reference

Donna Garvey Brickner

1

1 reference

25 July 2017

Ivelisse Cajigas

2

1 reference

25 July 2017

Yvonne Fondufe-Mittendorf

3

1 reference

25 July 2017

Sara Ahmed

4

1 reference

25 July 2017

Pei-Chih Lee

5

1 reference

25 July 2017

Jonathan Widom

6

1 reference

25 July 2017

Jason H Brickner

7

1 reference

25 July 2017

language of work or name

English

0 references

publication date

1 April 2007

1 reference

25 July 2017

1 reference

25 July 2017

5

1 reference

25 July 2017

4

1 reference

25 July 2017

e81

1 reference

Creative Commons Attribution 4.0 International

25 July 2017

start time

20 March 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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SAGA interacting factors confine sub-diffusion of transcribed genes to the nuclear envelope

21 June 2018

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The locus control region is required for association of the murine beta-globin locus with engaged transcription factories during erythroid maturation

21 June 2018

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DNA methylation supports intrinsic epigenetic memory in mammalian cells

21 June 2018

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The mobile nucleoporin Nup2p and chromatin-bound Prp20p function in endogenous NPC-mediated transcriptional control

21 June 2018

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Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling

21 June 2018

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Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning

21 June 2018

1 reference

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Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin

21 June 2018

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Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss

21 June 2018

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Genome-scale identification of nucleosome positions in S. cerevisiae

21 June 2018

1 reference

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Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

21 June 2018

1 reference

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Reverse recruitment: the Nup84 nuclear pore subcomplex mediates Rap1/Gcr1/Gcr2 transcriptional activation

21 June 2018

1 reference

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Multiple pathways tether telomeres and silent chromatin at the nuclear periphery: functional implications for sir-mediated repression.

21 June 2018

1 reference

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Maintenance of gene expression patterns

21 June 2018

1 reference

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The Yaf9 component of the SWR1 and NuA4 complexes is required for proper gene expression, histone H4 acetylation, and Htz1 replacement near telomeres

21 June 2018

1 reference

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Gene recruitment of the activated INO1 locus to the nuclear membrane

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Phospholipid metabolism regulated by a transcription factor sensing phosphatidic acid.

21 June 2018

1 reference

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Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Acute infection and macrophage subversion by Mycobacterium tuberculosis require a specialized secretion system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Heterochromatin and epigenetic control of gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Targeting genes and transcription factors to segregated nuclear compartments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

A conserved ER targeting motif in three families of lipid binding proteins and in Opi1p binds VAP

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Modulation of ATP-dependent chromatin-remodeling complexes by inositol polyphosphates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Histone H3 variants specify modes of chromatin assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Chromatin boundaries in budding yeast: the nuclear pore connection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Programming off and on states in chromatin: mechanisms of Polycomb and trithorax group complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Block of HAC1 mRNA translation by long-range base pairing is released by cytoplasmic splicing upon induction of the unfolded protein response

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

The Saccharomyces cerevisiae Isw2p-Itc1p complex represses INO1 expression and maintains cell morphology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Histone H2A.Z has a conserved function that is distinct from that of the major H2A sequence variants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

The product of the SNF2/SWI2 paralogue INO80 of Saccharomyces cerevisiae required for efficient expression of various yeast structural genes is part of a high-molecular-weight protein complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Nuclear compartments and gene regulation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Association of transcriptionally silent genes with Ikaros complexes at centromeric heterochromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

SOI1 encodes a novel, conserved protein that promotes TGN-endosomal cycling of Kex2p and other membrane proteins by modulating the function of two TGN localization signals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

GFP tagging of budding yeast chromosomes reveals that protein-protein interactions can mediate sister chromatid cohesion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

tRNA ligase is required for regulated mRNA splicing in the unfolded protein response

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

The SNF2/SWI2/GAM1/TYE3/RIC1 gene is involved in the coordinate regulation of phospholipid synthesis in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Regulatory mutations of inositol biosynthesis in yeast: isolation of inositol-excreting mutants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Organization of theGAL1–GAL10intergeaic control region chromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Eucaryotic RNA polymerase conditional mutant that rapidly ceases mRNA synthesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Biosynthesis of inositol in yeast. Primary structure of myo-inositol-1-phosphate synthase (EC 5.5.1.4) and functional analysis of its structural gene, the INO1 locus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Analysis of sequences in the INO1 promoter that are involved in its regulation by phospholipid precursors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

The origin of pattern and polarity in the Drosophila embryo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

3'-end formation signals modulate the association of genes with the nuclear periphery as well as mRNP dot formation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Nup-PI: the nucleopore-promoter interaction of genes in yeast

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Perturbation of nuclear architecture by long-distance chromosome interactions.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Genetic modification of heterochromatic association and nuclear organization in Drosophila.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Multiple mechanisms provide rapid and stringent glucose repression of GAL gene expression in Saccharomyces cerevisiae

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1828143

Conserved Histone Variant H2A.Z Protects Euchromatin from the Ectopic Spread of Silent Heterochromatin

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17373856

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Nuclear pore association confers optimal expression levels for an inducible yeast gene

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17373856

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PBIO.0050081

1 reference

release_abc7acmptrh3pjezwgoopavy6u

25 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/abc7acmptrh3pjezwgoopavy6u

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

1828143

1 reference

25 July 2017

1 reference