A rapid and efficient method for cloning genes of type II restriction-modification systems by use of a killer plasmid. (Q33283172)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17468281%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

title

A rapid and efficient method for cloning genes of type II restriction-modification systems by use of a killer plasmid (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17468281%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

1

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30 December 2019

2

Tadeusz Kaczorowski

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30 December 2019

language of work or name

English

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publication date

27 April 2007

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Applied and Environmental Microbiology

30 December 2019

published in

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30 December 2019

volume

73

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30 December 2019

issue

13

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30 December 2019

page(s)

4286-4293

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REBASE--enzymes and genes for DNA restriction and modification

30 December 2019

cites work

1 reference

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Transcription regulation of the EcoRV restriction-modification system

21 June 2018

1 reference

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How restriction enzymes became the workhorses of molecular biology

21 June 2018

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Environmental genome shotgun sequencing of the Sargasso Sea

21 June 2018

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Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

21 June 2018

1 reference

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Genetic Organization and Molecular Analysis of the Eco VIII Restriction-Modification System of Escherichia coli E1585-68 and Its Comparison with Isospecific Homologs

21 June 2018

1 reference

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C.EcoO109I, a regulatory protein for production of EcoO109I restriction endonuclease, specifically binds to and bends DNA upstream of its translational start site

21 June 2018

1 reference

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Understanding the evolution of restriction-modification systems: clues from sequence and structure comparisons.

21 June 2018

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Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolution

21 June 2018

1 reference

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Structure and function of type II restriction endonucleases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning, expression, and purification of a thermostable nonhomodimeric restriction enzyme, BslI.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Role and mechanism of action of C. PvuII, a regulatory protein conserved among restriction-modification systems

21 June 2018

1 reference

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Structural organization and regulation of the plasmid-borne type II restriction-modification system Kpn2I from Klebsiella pneumoniae RFL2.

21 June 2018

1 reference

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The glucuronic acid utilization gene cluster from Bacillus stearothermophilus T-6.

21 June 2018

1 reference

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Genomic DNA sequencing by SPEL-6 primer walking using hexamer ligation

21 June 2018

1 reference

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Characterization of LlaCI, a new restriction-modification system from Lactococcus lactis subsp. cremoris W15.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Recognition and cleavage of DNA by type-II restriction endonucleases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Structure of pvu II DNA-(cytosine N4) methyltransferase, an example of domain permutation and protein fold assignment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning and characterization of the Bg/II restriction-modification system reveals a possible evolutionary footprint

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Sporulation gene spoIIB from Bacillus subtilis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

The 'endo-blue method' for direct cloning of restriction endonuclease genes in E. coli.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning of the ppu21IM gene using a in vivo selection method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Structure-guided analysis reveals nine sequence motifs conserved among DNA amino-methyltransferases, and suggests a catalytic mechanism for these enzymes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Organization of target-recognizing domains in the multispecific DNA (cytosine-5)methyltransferases of Bacillus subtilis phages SPR and phi 3T.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Sequential order of target-recognizing domains in multispecific DNA-methyltransferases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning type-II restriction and modification genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning the DdeI restriction-modification system using a two-step method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Genetic applications of an inverse polymerase chain reaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning, characterization and heterologous expression of the SmaI restriction-modification system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning the BamHI restriction modification system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Organization of restriction-modification systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

A family of regulatory genes associated with type II restriction-modification systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

A new method for the rapid identification of genes encoding restriction and modification enzymes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Vectorette PCR: a novel approach to genomic walking

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Amino acid sequence arrangements of DNA-methyltransferases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Recognition sequence of restriction endonuclease III from Hemophilus influenzae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Construction and characterization of new cloning vehicle. II. A multipurpose cloning system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Crystal structure of the restriction-modification system control element C.Bcll and mapping of its binding site

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Characterization of pEC156, a ColE1-type plasmid from Escherichia coli E1585-68 that carries genes of the EcoVIII restriction-modification system

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Nucleotide sequence of the gene encoding the BstLVI DNA methyltransferase: comparison with other amino-DNA methyltransferases

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

M.BssHII, a multispecific cytosine-C5-DNA-methyltransferase with unusual target recognizing properties

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Cloning, analysis and expression of the HindIII R-M-encoding genes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Organization and gene expression within restriction-modification systems of herpetosiphon giganteus

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

New plasmids carrying antibiotic-resistance cassettes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932789

Use of vectorette and subvectorette PCR to isolate transgene flanking DNA

31 October 2018

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12 December 2020

A simple and efficient method to determine the terminal sequences of restriction fragments containing known sequences

1 reference

12 December 2020

DNA methylases of Hemophilus influenzae Rd. I. Purification and properties

1 reference

12 December 2020

Cloning the modification methylase gene of Bacillus sphaericus R in Escherichia coli

1 reference

12 December 2020

Operator sequences for the regulatory proteins of restriction modification systems

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.00119-07

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17468281%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17468281%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

PubMed publication ID

17468281

1 reference