Bayesian refinement of protein functional site matching (Q33291227)

25 July 2017

title

Bayesian refinement of protein functional site matching (English)

1 reference

25 July 2017

5

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25 July 2017

1

Kanti V Mardia

1 reference

25 July 2017

Vysaul B Nyirongo

2

1 reference

25 July 2017

Peter J Green

series ordinal

3

1 reference

25 July 2017

Nicola D Gold

series ordinal

4

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25 July 2017

publication date

17 July 2007

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25 July 2017

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25 July 2017

volume

8

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25 July 2017

page(s)

257

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2105-8-257

25 July 2017

exact match

0 references

cites work

Using a library of structural templates to recognise catalytic sites and explore their evolution in homologous families

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Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions

21 June 2018

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Recognition of functional sites in protein structures.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

SCOP database in 2004: refinements integrate structure and sequence family data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

A model for statistical significance of local similarities in structure.

21 June 2018

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21 June 2018

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Structural motif of phosphate-binding site common to various protein superfamilies: all-against-all structural comparison of protein-mononucleotide complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Recognition of spatial motifs in protein structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

21 June 2018

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Protein structure comparison by alignment of distance matrices

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Protein superfamilies and domain superfolds

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

A graph-theoretic approach to the identification of three-dimensional patterns of amino acid side-chains in protein structures

21 June 2018

1 reference

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Role of a Buried Acid Group in the Mechanism of Action of Chymotrypsin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Fold independent structural comparisons of protein-ligand binding sites for exploring functional relationships

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Inferring functional relationships of proteins from local sequence and spatial surface patterns

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Identification of protein functions from a molecular surface database, eF-site.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

A new method to detect related function among proteins independent of sequence and fold homology.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1940029

Structure of Subtilisin BPN′ at 2.5 Å Resolution

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17640336

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-8-257

1 reference

journals/bmcbi/MardiaNGGW07

25 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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1 reference

25 July 2017

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