Bistability and oscillations in the Huang-Ferrell model of MAPK signaling (Q33301005)

25 July 2017

Bistability and oscillations in the Huang-Ferrell model of MAPK signaling (English)

1 reference

25 July 2017

0 references

Liang Qiao

1

1 reference

25 July 2017

Robert B Nachbar

series ordinal

2

1 reference

25 July 2017

Ioannis G Kevrekidis

series ordinal

3

1 reference

25 July 2017

Stanislav Y Shvartsman

series ordinal

4

1 reference

25 July 2017

6 August 2007

1 reference

PLOS Computational Biology

25 July 2017

1 reference

25 July 2017

3

1 reference

25 July 2017

9

1 reference

25 July 2017

1819-1826

1 reference

Creative Commons Attribution 4.0 International

25 July 2017

start time

28 September 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Growth factor-induced MAPK network topology shapes Erk response determining PC-12 cell fate

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Response to bistability in apoptosis: roles of bax, bcl-2, and mitochondrial permeability transition pores

21 June 2018

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Variability and memory of protein levels in human cells

21 June 2018

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Dynamic regulation of ERK2 nuclear translocation and mobility in living cells

21 June 2018

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Physicochemical modelling of cell signalling pathways.

21 June 2018

1 reference

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Statistical epistasis is a generic feature of gene regulatory networks

21 June 2018

1 reference

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Bistability from double phosphorylation in signal transduction. Kinetic and structural requirements

21 June 2018

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Systems analysis of PKA-mediated phosphorylation gradients in live cardiac myocytes

21 June 2018

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Structural kinetic modeling of metabolic networks

21 June 2018

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Understanding bistability in complex enzyme-driven reaction networks

21 June 2018

1 reference

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Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

21 June 2018

1 reference

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Cell-signalling dynamics in time and space

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Signal processing in the TGF-beta superfamily ligand-receptor network

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Bistability, stochasticity, and oscillations in the mitogen-activated protein kinase cascade

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Multisite protein phosphorylation makes a good threshold but can be a poor switch

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Dynamic properties of network motifs contribute to biological network organization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Evolvability of cell specification mechanisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

The evolution of molecular genetic pathways and networks

21 June 2018

1 reference

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The sonic hedgehog signaling system as a bistable genetic switch

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

A positive-feedback-based bistable 'memory module' that governs a cell fate decision

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

The Roles of APC and Axin Derived from Experimental and Theoretical Analysis of the Wnt Pathway

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by databased modeling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Network dynamics and cell physiology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Control motifs for intracellular regulatory networks.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

The biochemical basis of an all-or-none cell fate switch in Xenopus oocytes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Ultrasensitivity in the mitogen-activated protein kinase cascade

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Specificity of receptor tyrosine kinase signaling: transient versus sustained extracellular signal-regulated kinase activation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Biological network design strategies: discovery through dynamic optimization.

21 June 2018

1 reference

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Kinetic diversity in G-protein-coupled receptor signalling

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Using chemical reaction network theory to discard a kinetic mechanism hypothesis.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Robustness properties of apoptosis models with respect to parameter variations and intrinsic noise.

31 October 2018

1 reference

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New analysis technique for multistability detection.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Robustness analysis of biochemical network models.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Effect of the MAPK cascade structure, nuclear translocation and regulation of transcription factors on gene expression.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Automatic network coupling analysis for dynamical systems based on detailed kinetic models.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Bifurcation discovery tool

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Resistance to signal activation governs design features of the MAP kinase signaling module

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Contrasting selection pressures on components of the Ras‐mediated signal transduction pathway in Drosophila

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Control of MAPK signalling: from complexity to what really matters

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994985

Negative feedback and ultrasensitivity can bring about oscillations in the mitogen-activated protein kinase cascades

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17907797

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A mechanistic study of evolvability using the mitogen-activated protein kinase cascade

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17907797

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The statistical mechanics of complex signaling networks: nerve growth factor signaling

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17907797

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.0030184

1 reference

journals/ploscb/QiaoNKS07

25 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 July 2017

1 reference