Genome-wide patterns of nucleotide polymorphism in domesticated rice (Q33301014)

25 July 2017

title

Genome-wide patterns of nucleotide polymorphism in domesticated rice (English)

1 reference

25 July 2017

1 reference

Thomas L York

6

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Rasmus Nielsen

object named as

Rasmus Nielsen

9

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Carlos D. Bustamante

11

object named as

Carlos D Bustamante

1 reference

25 July 2017

Ana L Caicedo

1

1 reference

25 July 2017

Scott H Williamson

2

1 reference

25 July 2017

Ryan D Hernandez

3

1 reference

25 July 2017

Adam Boyko

4

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25 July 2017

Adi Fledel-Alon

5

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25 July 2017

Nicholas R Polato

7

1 reference

25 July 2017

Kenneth M Olsen

8

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25 July 2017

Susan R McCouch

10

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25 July 2017

Michael D Purugganan

12

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25 July 2017

publication date

6 August 2007

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25 July 2017

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25 July 2017

volume

3

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25 July 2017

issue

9

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25 July 2017

page(s)

1745-1756

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Creative Commons Attribution 4.0 International

25 July 2017

copyright license

start time

28 September 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa

21 June 2018

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Selection under domestication: evidence for a sweep in the rice waxy genomic region

21 June 2018

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Rice domestication by reducing shattering

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Population genetics of polymorphism and divergence for diploid selection models with arbitrary dominance

21 June 2018

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Selective Sweeps in the Presence of Interference Among Partially Linked Loci

21 June 2018

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Maximum likelihood and Bayesian methods for estimating the distribution of selective effects among classes of mutations using DNA polymorphism data.

21 June 2018

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Patterns of diversity and recombination along chromosome 1 of maize (Zea mays ssp. mays L.).

21 June 2018

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Evolution, consequences and future of plant and animal domestication

21 June 2018

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

21 June 2018

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

21 June 2018

1 reference

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A comprehensive rice transcript map containing 6591 expressed sequence tag sites

21 June 2018

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Generating samples under a Wright-Fisher neutral model of genetic variation

21 June 2018

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Directional selection and the site-frequency spectrum.

21 June 2018

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Hitchhiking under positive Darwinian selection

21 June 2018

1 reference

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Inference of population structure using multilocus genotype data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Investigation of the bottleneck leading to the domestication of maize

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Conservation of rice genetic resources: the role of the International Rice Genebank at IRRI.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Estimating ancestral population parameters.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

The hitch-hiking effect of a favourable gene

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

21 June 2018

12 December 2020

The "hitchhiking effect" revisited

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Genealogy of neutral genes and spreading of selected mutations in a geographically structured population

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Population genetics of polymorphism and divergence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

The effects of artificial selection on the maize genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

A statistical characterization of consistent patterns of human immunodeficiency virus evolution within infected patients

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.).

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Approximating selective sweeps.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Selection versus demography: a multilocus investigation of the domestication process in maize

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Polyphyletic origin of cultivated rice: based on the interspersion pattern of SINEs

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Linkage disequilibrium, gene trees and selfing: an ancestral recombination graph with partial self-fertilization

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994709

Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes

31 October 2018

1 reference

12 December 2020

On the fixation probability of mutant genes in a subdivided population

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12 December 2020

Domestication history in the Medicago sativa species complex: inferences from nuclear sequence polymorphism

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12 December 2020

Fixation probability in spatially changing environments

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.0030163

Identifiers

DOI

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25 July 2017

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25 July 2017

1 reference