DNA indels in coding regions reveal selective constraints on protein evolution in the human lineage. (Q33302559)

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8 January 2020

title

DNA indels in coding regions reveal selective constraints on protein evolution in the human lineage (English)

1 reference

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8 January 2020

0 references

2

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8 January 2020

Peter F Arndt

series ordinal

3

1 reference

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8 January 2020

author name string

Nicole de la Chaux

series ordinal

1

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8 January 2020

publication date

12 October 2007

1 reference

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8 January 2020

published in

BMC Evolutionary Biology

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8 January 2020

volume

7

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8 January 2020

page(s)

191

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The Average Number of Generations until Fixation of a Mutant Gene in a Finite Population.

8 January 2020

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28 July 2018

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Positive natural selection in the human lineage

28 July 2018

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Natural selection on protein-coding genes in the human genome

28 July 2018

1 reference

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28 July 2018

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28 July 2018

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A scan for positively selected genes in the genomes of humans and chimpanzees

28 July 2018

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28 July 2018

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Finishing the euchromatic sequence of the human genome

28 July 2018

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DNA sequence and comparative analysis of chimpanzee chromosome 22.

28 July 2018

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Occurrence and consequences of coding sequence insertions and deletions in Mammalian genomes

28 July 2018

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Comparative analysis of amino acid repeats in rodents and humans

28 July 2018

1 reference

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Gaps in structurally similar proteins: towards improvement of multiple sequence alignment

28 July 2018

1 reference

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Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios

28 July 2018

1 reference

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Majority of divergence between closely related DNA samples is due to indels

28 July 2018

1 reference

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LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA

28 July 2018

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Genomic divergences between humans and other hominoids and the effective population size of the common ancestor of humans and chimpanzees

28 July 2018

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Gene ontology: tool for the unification of biology

28 July 2018

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28 July 2018

The Protein Data Bank

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PAML: a program package for phylogenetic analysis by maximum likelihood

28 July 2018

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Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151769

Evolution at two levels in humans and chimpanzees

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151769

The majority of recent short DNA insertions in the human genome are tandem duplications.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151769

Estimation of amino acid residue substitution rates at local spatial regions and application in protein function inference: a Bayesian Monte Carlo approach.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151769

Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151769

Analysis of insertions/deletions in protein structures

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17935613

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A DNA sequence evolution analysis generalized by simulation and the markov chain monte carlo method implicates strand slippage in a majority of insertions and deletions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17935613

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2148-7-191

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17935613%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

8 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-7-191

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17935613%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

PubMed publication ID

17935613

1 reference