PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas (Q33314681)

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English	PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

25 July 2017

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Europe PubMed Central

PhyloSort: a user-friendly phylogenetic sorting tool and its application to estimating the cyanobacterial contribution to the nuclear genome of Chlamydomonas (English)

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Europe PubMed Central

PubMed publication ID

25 July 2017

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Ahmed Moustafa

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Debashish Bhattacharya

2

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Debashish Bhattacharya

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Europe PubMed Central

PubMed publication ID

25 July 2017

publication date

15 January 2008

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Europe PubMed Central

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25 July 2017

BMC Evolutionary Biology

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Europe PubMed Central

PubMed publication ID

25 July 2017

8

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Europe PubMed Central

PubMed publication ID

25 July 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

The origin and establishment of the plastid in algae and plants.

1 reference

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14 July 2018

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

1 reference

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14 July 2018

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

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Chimeric plastid proteome in the Florida "red tide" dinoflagellate Karenia brevis

1 reference

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14 July 2018

Phylogenomic analysis identifies red algal genes of endosymbiotic origin in the chromalveolates

1 reference

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The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists

1 reference

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14 July 2018

PhyloGenie: automated phylome generation and analysis

1 reference

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MUSCLE: a multiple sequence alignment method with reduced time and space complexity

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14 July 2018

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

1 reference

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A molecular timeline for the origin of photosynthetic eukaryotes

1 reference

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14 July 2018

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

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14 July 2018

Phylogenomics: intersection of evolution and genomics

1 reference

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Evolutionary analysis of Arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus

1 reference

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ATV: display and manipulation of annotated phylogenetic trees

1 reference

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14 July 2018

Gene ontology: tool for the unification of biology

1 reference

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14 July 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2254586

14 July 2018

The hglK gene is required for localization of heterocyst-specific glycolipids in the cyanobacterium Anabaena sp. strain PCC 7120

1 reference

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PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2254586

31 October 2018

Cyanobacterial contribution to algal nuclear genomes is primarily limited to plastid functions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2254586

31 October 2018

Mass identification of chloroplast proteins of endosymbiont origin by phylogenetic profiling based on organism-optimized homologous protein groups.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2254586

31 October 2018

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10.1186/1471-2148-8-6

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Europe PubMed Central

PubMed publication ID

25 July 2017

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https://scigraph.springernature.com/pub.10.1186/1471-2148-8-6

9 September 2019

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Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

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Europe PubMed Central

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25 July 2017

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