Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs (Q33326749)

25 July 2017

1 reference

title

Ornithine decarboxylase antizyme finder (OAF): fast and reliable detection of antizymes with frameshifts in mRNAs (English)

1 reference

25 July 2017

Michaël Bekaert

1

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Pavel Baranov

object named as

Pavel V Baranov

series ordinal

4

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John F Atkins

object named as

John F Atkins

series ordinal

3

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author name string

Ivaylo P Ivanov

series ordinal

2

1 reference

25 July 2017

2 April 2008

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25 July 2017

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25 July 2017

9

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25 July 2017

178

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https://scigraph.springernature.com/pub.10.1186/1471-2105-9-178

25 July 2017

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21 June 2018

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21 June 2018

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21 June 2018

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Polyamine transport by mammalian cells and mitochondria: role of antizyme and glycosaminoglycans

21 June 2018

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21 June 2018

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Predicting genes expressed via -1 and +1 frameshifts

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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P-site tRNA is a crucial initiator of ribosomal frameshifting.

21 June 2018

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Programmed +1 translational frameshifting in the yeast Saccharomyces cerevisiae results from disruption of translational error correction.

21 June 2018

1 reference

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Structure and function of the stimulatory RNAs involved in programmed eukaryotic-1 ribosomal frameshifting

21 June 2018

1 reference

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Determinants of proteasome recognition of ornithine decarboxylase, a ubiquitin-independent substrate

21 June 2018

1 reference

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Shifty ciliates: frequent programmed translational frameshifting in euplotids

21 June 2018

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21 June 2018

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21 June 2018

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Computational identification of putative programmed translational frameshift sites

21 June 2018

1 reference

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Recoding: translational bifurcations in gene expression.

21 June 2018

1 reference

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Regulation of cellular polyamines by antizyme

21 June 2018

1 reference

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RECODE: a database of frameshifting, bypassing and codon redefinition utilized for gene expression

21 June 2018

1 reference

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Identification and characterization of testis specific ornithine decarboxylase antizyme (OAZ-t) gene: expression in haploid germ cells and polyamine-induced frameshifting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Discovery of a spermatogenesis stage-specific ornithine decarboxylase antizyme: antizyme 3

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Antizyme2 is a negative regulator of ornithine decarboxylase and polyamine transport

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Identification of putative programmed -1 ribosomal frameshift signals in large DNA databases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

A second mammalian antizyme: conservation of programmed ribosomal frameshifting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Programmed translational frameshifting.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Ornithine decarboxylase antizyme: a novel type of regulatory protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Recoding: dynamic reprogramming of translation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

dbEST--database for "expressed sequence tags"

21 June 2018

1 reference

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Feedback repression of polyamine transport is mediated by antizyme in mammalian tissue-culture cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Antizyme protects against abnormal accumulation and toxicity of polyamines in ornithine decarboxylase-overproducing cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Autoregulatory frameshifting in decoding mammalian ornithine decarboxylase antizyme

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Ornithine decarboxylase is degraded by the 26S proteasome without ubiquitination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Antizyme1 mediates AURKAIP1-dependent degradation of Aurora-A.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Novel antizyme gene in Danio rerio expressed in brain and retina.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

ARFA: a program for annotating bacterial release factor genes, including prediction of programmed ribosomal frameshifting.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

An extended signal involved in eukaryotic -1 frameshifting operates through modification of the E site tRNA.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2375905

Antizyme, a mediator of ubiquitin-independent proteasomal degradation and its inhibitor localize to centrosomes and modulate centriole amplification

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18384676

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-9-178

1 reference

journals/bmcbi/BekaertIAB08

25 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

25 July 2017

1 reference

PubMed ID

18384676