A test-bed for optimizing high-resolution single particle reconstructions (Q33340907)

25 July 2017

A test-bed for optimizing high-resolution single particle reconstructions (English)

1 reference

Corrigendum to “A test-bed for optimizing high-resolution single particle reconstructions” [J. Struct. Biol. 163 (2008) 29–39]

25 July 2017

corrigendum / erratum

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author

Neil R Voss

4

1 reference

25 July 2017

Gabriel C Lander

2

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Bridget Carragher

object named as

Bridget Carragher

8

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author name string

Scott M Stagg

1

1 reference

25 July 2017

Joel Quispe

3

1 reference

25 July 2017

Anchi Cheng

5

1 reference

25 July 2017

Henry Bradlow

6

1 reference

25 July 2017

Steven Bradlow

7

1 reference

25 July 2017

Clinton S Potter

9

1 reference

25 July 2017

6 May 2008

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Journal of Structural Biology

25 July 2017

1 reference

25 July 2017

163

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25 July 2017

1

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25 July 2017

29-39

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Near-atomic resolution using electron cryomicroscopy and single-particle reconstruction

25 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

A dose-rate effect in single-particle electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Identification of secondary structure elements in intermediate-resolution density maps

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Ab initio resolution measurement for single particle structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Allosteric signaling of ATP hydrolysis in GroEL-GroES complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Lipid-protein interactions in double-layered two-dimensional AQP0 crystals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Fourier shell correlation threshold criteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Advantages of CCD detectors for de novo three-dimensional structure determination in single-particle electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

ACE: automated CTF estimation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Automated molecular microscopy: the new Leginon system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Noise bias in the refinement of structures derived from single particles

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

UCSF Chimera--a visualization system for exploratory research and analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Seeing GroEL at 6 A resolution by single particle electron cryomicroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Visualization of alpha-helical features in a density map constructed using 9 molecular images of the 1.8 MDa icosahedral core of pyruvate dehydrogenase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Historical background: Why is it important to improve automated particle selection methods?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

21 June 2018

12 December 2020

ATP-bound states of GroEL captured by cryo-electron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Solution structure of the E. coli 70S ribosome at 11.5 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

EMAN: semiautomated software for high-resolution single-particle reconstructions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Review: electron crystallography: present excitement, a nod to the past, anticipating the future

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Determination of the fold of the core protein of hepatitis B virus by electron cryomicroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Conformational variability in the refined structure of the chaperonin GroEL at 2.8 A resolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

The potential and limitations of neutrons, electrons and X-rays for atomic resolution microscopy of unstained biological molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Optimization of image collection for cellular electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

Particle finding in electron micrographs using a fast local correlation algorithm.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

A relational database for cryoEM: experience at one year and 50 000 images

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2505049

The correlation averaging of a regularly arranged bacterial cell envelope protein

31 October 2018

1 reference

PubMed

12 December 2020

Structure of keyhole limpet hemocyanin type 1 (KLH1) at 15 Å resolution by electron cryomicroscopy and angular reconstitution † 1 †This article is dedicated to the memory of Anneke van Heel. 1Edited by M.F. Moody

1 reference

PubMed

12 December 2020

Structure and function in GroEL-mediated protein folding

1 reference

PubMed

12 December 2020

10.1016/J.JSB.2008.04.005

Identifiers

DOI

1 reference

25 July 2017

1 reference

25 July 2017

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