Molecular evolution of B6 enzymes: binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme (Q33345009)

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English	Molecular evolution of B6 enzymes: binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme	scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Molecular evolution of B6 enzymes: binding of pyridoxal-5'-phosphate and Lys41Arg substitution turn ribonuclease A into a model B6 protoenzyme (English)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

4

object named as

Ersilia Marra

0 references

Rosa Anna Vacca

object named as

Rosa A Vacca

1

0 references

Sergio Giannattasio

object named as

Sergio Giannattasio

2

0 references

author name string

Guido Capitani

3

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Philipp Christen

5

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

publication date

19 June 2008

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

BMC Biochemistry

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

17

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Coot: model-building tools for molecular graphics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Crystalline desoxyribonuclease; isolation and general properties; spectrophotometric method for the measurement of desoxyribonuclease activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Pyridoxal phosphate enzymes: mechanistic, structural, and evolutionary considerations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

How does an enzyme evolved in vitro compare to naturally occurring homologs possessing the targeted function? Tyrosine aminotransferase from aspartate aminotransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

PHENIX: building new software for automated crystallographic structure determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

From cofactor to enzymes. The molecular evolution of pyridoxal-5'-phosphate-dependent enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

The molecular evolution of pyridoxal-5'-phosphate-dependent enzymes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Structure, evolution and action of vitamin B6-dependent enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Redesigning the substrate specificity of an enzyme by cumulative effects of the mutations of non-active site residues

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

The role of non-catalytic binding subsites in the endonuclease activity of bovine pancreatic ribonuclease A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Evolutionary relationships among pyridoxal-5'-phosphate-dependent enzymes. Regio-specific alpha, beta and gamma families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Conformation and reaction specificity in pyridoxal phosphate enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Chemical approaches to the properties of active sites of enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Rapid and efficient site-specific mutagenesis without phenotypic selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

The role of pyridoxal 5'-phosphate in glycogen phosphorylase catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Chemical modification by pyridoxal 5'-phosphate and cyclohexane-1,2-dione indicates that Lys-7 and Arg-10 are involved in the p2 phosphate-binding subsite of bovine pancreatic ribonuclease A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Modification of bovine pancreatic ribonuclease A with pyridoxal 5'-phosphate. Isolation and identification of derivatives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

Spectral properties of phosphopyridoxyl-Lys7(41)-ribonuclease A

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

21 June 2018

1.6 A structure of semisynthetic ribonuclease crystallized from aqueous ethanol. Comparison with crystals from salt solutions and with ribonuclease A from aqueous alcohol solutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

The sequence of amino acid residues in bovine pancreatic ribonuclease: revisions and confirmations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

Conversion of a PLP-dependent racemase into an aldolase by a single active site mutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

Recognizing very distant sequence relationships among proteins by family profile analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

Active-site Arg --> Lys substitutions alter reaction and substrate specificity of aspartate aminotransferase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

The determinants of the dimeric structure of seminal ribonuclease are located in its N-terminal region.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

Modification of ribonuclease A with pyridoxal-5'-phosphate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2443152

31 October 2018

The enantiomeric error frequency of aspartate aminotransferase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Schiff bases of pyridoxal phosphate with active center lysines of ribonuclease A

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conversion of tyrosine phenol-lyase to dicarboxylic amino acid beta-lyase, an enzyme not found in nature

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Some spectrophotometric and polarimetric experiments with ribonuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural basis for D-amino acid transamination by the pyridoxal 5'-phosphate-dependent catalytic antibody 15A9

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pyridoxal 5'-phosphate-dependent catalytic antibody

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Affinity Labeling of Pancreatic Ribonuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Monoclonal antibodies against Nalpha-(5'-phosphopyridoxyl)-L-lysine. Screening and spectrum of pyridoxal 5'-phosphate-dependent activities toward amino acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of ribonuclease A: results of joint neutron and X-ray refinement at 2.0-A resolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Site-directed mutagenesis of bovine pancreatic ribonuclease: lysine-41 and aspartate-121

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conversion of aspartate aminotransferase into an L-aspartate beta-decarboxylase by a triple active-site mutation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New muteins of RNase A with enhanced antitumor action

1 reference

https://pubmed.ncbi.nlm.nih.gov/18565210

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2091-9-17

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Dimensions Publication ID

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2091-9-17

9 September 2019

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

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