Insight into microevolution of Yersinia pestis by clustered regularly interspaced short palindromic repeats (Q33350195)

26 July 2017

Insight into microevolution of Yersinia pestis by clustered regularly interspaced short palindromic repeats (English)

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26 July 2017

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Svetlana V. Dentovskaya

8

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26 July 2017

12

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26 July 2017

13

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26 July 2017

Christine Pourcel

7

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author name string

Yujun Cui

1

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26 July 2017

Yanjun Li

2

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26 July 2017

Olivier Gorgé

3

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26 July 2017

Mikhail E Platonov

4

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26 July 2017

Yanfeng Yan

5

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26 July 2017

Zhaobiao Guo

6

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26 July 2017

Sergey V Balakhonov

9

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26 July 2017

Xiaoyi Wang

10

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26 July 2017

Yajun Song

11

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26 July 2017

Ruifu Yang

14

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26 July 2017

language of work or name

English

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publication date

9 July 2008

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26 July 2017

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26 July 2017

3

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26 July 2017

e2652

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26 July 2017

7

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Creative Commons Attribution 4.0 International

26 July 2017

start time

9 July 2008

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Different region analysis for genotyping Yersinia pestis isolates from China

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CRISPRcompar: a website to compare clustered regularly interspaced short palindromic repeats.

21 June 2018

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CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea

21 June 2018

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Phage response to CRISPR-encoded resistance in Streptococcus thermophilus

21 June 2018

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Analysis of the three Yersinia pestis CRISPR loci provides new tools for phylogenetic studies and possibly for the investigation of ancient DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing

21 June 2018

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CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

21 June 2018

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The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

21 June 2018

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Corynebacterium diphtheriae spoligotyping based on combined use of two CRISPR loci

21 June 2018

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CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

A horizontally acquired filamentous phage contributes to the pathogenicity of the plague bacillus

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

A putative viral defence mechanism in archaeal cells

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Identification of different regions among strains of Yersinia pestis by suppression subtractive hybridization

21 June 2018

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Multiple-locus variable number tandem repeats analysis for genetic fingerprinting of pathogenic bacteria.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Microevolution and history of the plague bacillus, Yersinia pestis

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Comparative and evolutionary genomics of Yersinia pestis

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Natural history of plague: perspectives from more than a century of research

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Complete Genome Sequence of Yersinia pestis Strain 91001, an Isolate Avirulent to Humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

DNA microarray analysis of genome dynamics in Yersinia pestis: insights into bacterial genome microevolution and niche adaptation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Molecular biological characteristics and genetic significance of Yersinia pestis in China

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Intraspecific diversity of Yersinia pestis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Yersinia pestis as a dangerous biological weapon

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Biological warfare at the 1346 siege of Caffa

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Bacterial pathogens as biological weapons and agents of bioterrorism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Identification and characterization of Leuconostoc fallax strains isolated from an industrial sauerkraut fermentation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Identification of genes that are associated with DNA repeats in prokaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Identification and characterization of variable-number tandem repeats in the Yersinia pestis genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Plague as a biological weapon: medical and public health management. Working Group on Civilian Biodefense

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Differentiation of Mycobacterium tuberculosis isolates by spoligotyping and IS6110 restriction fragment length polymorphism.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Yersinia pestis--etiologic agent of plague

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Plague pandemics investigated by ribotyping of Yersinia pestis strains

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Determination of genome size, macrorestriction pattern polymorphism, and nonpigmentation-specific deletion in Yersinia pestis by pulsed-field gel electrophoresis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2440536

Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002652

Characterisation of Escherichia coli K-12 mutants defective in formate-dependent nitrite reduction: essential roles for hemN and the menFDBCE operon.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0002652

10.1371/JOURNAL.PONE.0002652

21 January 2018

Identifiers

DOI

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26 July 2017

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26 July 2017

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