The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes (Q33360968)

26 July 2017

The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes (English)

1 reference

26 July 2017

Brachypodium distachyon

1 reference

1 reference

Gerard R Lazo

3

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author name string

Esteban Bortiri

1

1 reference

26 July 2017

Devin Coleman-Derr

2

1 reference

26 July 2017

Olin D Anderson

4

1 reference

26 July 2017

Yong Q Gu

5

1 reference

26 July 2017

31 July 2008

1 reference

26 July 2017

1 reference

26 July 2017

1

1 reference

26 July 2017

61

1 reference

https://scigraph.springernature.com/pub.10.1186/1756-0500-1-61

26 July 2017

0 references

cites work

The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Complete chloroplast genome sequences of Hordeum vulgare, Sorghum bicolor and Agrostis stolonifera, and comparative analyses with other grass genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Plastid biotechnology: prospects for herbicide and insect resistance, metabolic engineering and molecular farming

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Pattern and rate of indel evolution inferred from whole chloroplast intergenic regions in sugarcane, maize and rice.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Alignment of the genomes of Brachypodium distachyon and temperate cereals and grasses using bacterial artificial chromosome landing with fluorescence in situ hybridization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

A rapid and efficient transformation protocol for the grass Brachypodium distachyon

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Laying the cytotaxonomic foundations of a new model grass, Brachypodium distachyon (L.) Beauv

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Whole chloroplast genome comparison of rice, maize, and wheat: implications for chloroplast gene diversification and phylogeny of cereals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Structural features of a wheat plastome as revealed by complete sequencing of chloroplast DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

MRBAYES: Bayesian inference of phylogenetic trees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

VISTA : visualizing global DNA sequence alignments of arbitrary length

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Simple methods for testing the molecular evolutionary clock hypothesis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

Chloroplast DNA inversions and the origin of the grass family (Poaceae)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2527572

BAC 'landing' on chromosomes of Brachypodium distachyon for comparative genome alignment

21 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18710514

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Elimination of deleterious mutations in plastid genomes by gene conversion

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18710514

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1756-0500-1-61

1 reference

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference