SigWin-detector: a Grid-enabled workflow for discovering enriched windows of genomic features related to DNA sequences. (Q33360974)

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12 January 2020

title

SigWin-detector: a Grid-enabled workflow for discovering enriched windows of genomic features related to DNA sequences (English)

1 reference

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12 January 2020

1 reference

3

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12 January 2020

Adam Belloum

4

1 reference

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12 January 2020

author name string

Márcia A Inda

1

1 reference

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12 January 2020

Marinus F van Batenburg

2

1 reference

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12 January 2020

Dmitry Vasunin

5

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12 January 2020

Adianto Wibisono

6

1 reference

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12 January 2020

Antoine H C van Kampen

7

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12 January 2020

Timo M Breit

8

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12 January 2020

publication date

8 August 2008

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12 January 2020

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12 January 2020

volume

1

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12 January 2020

page(s)

63

1 reference

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The low down on e-science and grids for biology

12 January 2020

cites work

1 reference

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A semantic web approach applied to integrative bioinformatics experimentation: a biological use case with genomics data

21 June 2018

1 reference

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 June 2018

1 reference

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DNA methylation profiling of human chromosomes 6, 20 and 22

21 June 2018

1 reference

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Detecting transcriptionally active regions using genomic tiling arrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

Taverna: a tool for building and running workflows of services

21 June 2018

1 reference

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The promise of a virtual lab in drug discovery

21 June 2018

1 reference

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Mapping of genetic and epigenetic regulatory networks using microarrays

21 June 2018

1 reference

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The human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes

21 June 2018

1 reference

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Large clusters of co-expressed genes in the Drosophila genome.

21 June 2018

1 reference

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Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

Evidence for large domains of similarly expressed genes in the Drosophila genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

Large-scale analysis of the human and mouse transcriptomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

Genome-wide analysis of DNA copy-number changes using cDNA microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

Genome-scale mapping of DNase I sensitivity in vivo using tiling DNA microarrays.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2533338

31 October 2018

Identifiers

DOI

10.1186/1756-0500-1-63

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18710516%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

12 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1756-0500-1-63

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18710516%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

PubMed publication ID

18710516

1 reference