Building consensus spectral libraries for peptide identification in proteomics (Q33370900)

26 July 2017

title

Building consensus spectral libraries for peptide identification in proteomics (English)

1 reference

26 July 2017

1

Henry Lam

1 reference

26 July 2017

6

Ruedi Aebersold

1 reference

26 July 2017

4

Jimmy K Eng

1 reference

26 July 2017

2

Eric W Deutsch

1 reference

26 July 2017

3

James S Eddes

1 reference

26 July 2017

5

Stephen E Stein

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26 July 2017

publication date

21 September 2008

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26 July 2017

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26 July 2017

volume

5

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26 July 2017

issue

10

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26 July 2017

page(s)

873-875

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

26 July 2017

cites work

1 reference

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Optimization and testing of mass spectral library search algorithms for compound identification

21 June 2018

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Development and validation of a spectral library searching method for peptide identification from MS/MS.

21 June 2018

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Methods for peptide identification by spectral comparison

21 June 2018

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Analysis of peptide MS/MS spectra from large-scale proteomics experiments using spectrum libraries

21 June 2018

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Challenges and opportunities in proteomics data analysis

21 June 2018

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Using annotated peptide mass spectrum libraries for protein identification

21 June 2018

1 reference

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A uniform proteomics MS/MS analysis platform utilizing open XML file formats

21 June 2018

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21 June 2018

The PeptideAtlas project

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Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database

21 June 2018

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Human Plasma PeptideAtlas

21 June 2018

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Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book

21 June 2018

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Quantitative proteome analysis of human plasma following in vivo lipopolysaccharide administration using 16O/18O labeling and the accurate mass and time tag approach.

21 June 2018

1 reference

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Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

21 June 2018

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A common open representation of mass spectrometry data and its application to proteomics research

21 June 2018

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The ABC's (and XYZ's) of peptide sequencing

21 June 2018

1 reference

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The International Protein Index: an integrated database for proteomics experiments

21 June 2018

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High-performance peptide identification by tandem mass spectrometry allows reliable automatic data processing in proteomics.

21 June 2018

1 reference

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TANDEM: matching proteins with tandem mass spectra

21 June 2018

1 reference

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A statistical model for identifying proteins by tandem mass spectrometry

21 June 2018

1 reference

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Mass spectrometry-based proteomics

21 June 2018

1 reference

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Data analysis--the Achilles heel of proteomics

21 June 2018

1 reference

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ProbID: a probabilistic algorithm to identify peptides through sequence database searching using tandem mass spectral data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637392

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637392

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637392

The critical evaluation of a comprehensive mass spectral library

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637392

Method to compare collision-induced dissociation spectra of peptides: potential for library searching and subtractive analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2637392

Head-to-Head Comparison of Serum Fractionation Techniques

21 June 2018

1 reference

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MS2Grouper: group assessment and synthetic replacement of duplicate proteomic tandem mass spectra.

31 October 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.1254

inferred from DOI database lookup

7 January 2021

based on heuristic

Implementation and application of a versatile clustering tool for tandem mass spectrometry data

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.1254

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NMETH.1254

1 reference

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference