Gene expression profiling of whole blood: comparison of target preparation methods for accurate and reproducible microarray analysis (Q33397615)

26 July 2017

Gene expression profiling of whole blood: comparison of target preparation methods for accurate and reproducible microarray analysis (English)

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26 July 2017

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1 reference

Dongseok Choi

6

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ORCID Public Data File 2021

author name string

Kristina Vartanian

1

1 reference

26 July 2017

Rachel Slottke

2

1 reference

26 July 2017

Timothy Johnstone

3

1 reference

26 July 2017

Amanda Casale

4

1 reference

26 July 2017

Stephen R Planck

5

1 reference

26 July 2017

Justine R Smith

7

1 reference

26 July 2017

James T Rosenbaum

8

1 reference

26 July 2017

Christina A Harrington

9

1 reference

26 July 2017

language of work or name

English

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publication date

5 January 2009

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26 July 2017

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26 July 2017

10

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26 July 2017

2

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https://scigraph.springernature.com/pub.10.1186/1471-2164-10-2

26 July 2017

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cites work

Big results from small samples: evaluation of amplification protocols for gene expression profiling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Functional identity of genes detectable in expression profiling assays following globin mRNA reduction of peripheral blood samples

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Effects of globin mRNA reduction methods on gene expression profiles from whole blood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Increased DNA microarray hybridization specificity using sscDNA targets

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

The transcriptome in blood: challenges and solutions for robust expression profiling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Microarray-based comparison of three amplification methods for nanogram amounts of total RNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Summaries of Affymetrix GeneChip probe level data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Individuality and variation in gene expression patterns in human blood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Quantification of relative changes in specific mRNAs from frozen whole blood - methodological considerations and clinical implications.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Comparison of different isolation techniques prior gene expression profiling of blood derived cells: impact on physiological responses, on overall expression and the role of different cell types.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Analysis of high density expression microarrays with signed-rank call algorithms.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Robust estimators for expression analysis.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Stabilization of mRNA expression in whole blood samples.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Replacing cRNA targets with cDNA reduces microarray cross-hybridization

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

A highly standardized, robust, and cost-effective method for genome-wide transcriptome analysis of peripheral blood applicable to large-scale clinical trials

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Whole blood and leukocyte RNA isolation for gene expression analyses

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2649161

Characterization of globin RNA interference in gene expression profiling of whole-blood samples

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19123946

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Linear mRNA amplification from as little as 5 ng total RNA for global gene expression analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19123946

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-10-2

1 reference

Dimensions Publication ID

26 July 2017

0 references

1 reference

26 July 2017

1 reference