Genome-scale constraint-based modeling of Geobacter metallireducens (Q33403641)

26 July 2017

Genome-scale constraint-based modeling of Geobacter metallireducens (English)

1 reference

Geobacter metallireducens

26 July 2017

object named as

Geobacter metallireducens

1 reference

Jessica E Butler

3

0 references

Derek R. Lovley

8

object named as

Derek R Lovley

1 reference

26 July 2017

Radhakrishnan Mahadevan

9

object named as

Radhakrishnan Mahadevan

1 reference

26 July 2017

Jun Sun

1

1 reference

26 July 2017

Bahareh Sayyar

2

1 reference

26 July 2017

Priti Pharkya

4

1 reference

26 July 2017

Tom R Fahland

5

1 reference

26 July 2017

Iman Famili

6

1 reference

26 July 2017

Christophe H Schilling

7

1 reference

26 July 2017

28 January 2009

1 reference

26 July 2017

1 reference

26 July 2017

3

1 reference

26 July 2017

15

1 reference

Creative Commons Attribution 2.0 Generic

26 July 2017

start time

28 January 2009

1 reference

April 2022 Public Data File from Crossref

Creative Commons Attribution 2.0 Generic

0 references

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1752-0509-3-15

0 references

cites work

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21 June 2018

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Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site

21 June 2018

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Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data

21 June 2018

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Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe(III)-nitrilotriacetic acid

21 June 2018

1 reference

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Genes, enzymes, and regulation of para-cresol metabolism in Geobacter metallireducens

21 June 2018

1 reference

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Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses

21 June 2018

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Biofilm and nanowire production leads to increased current in Geobacter sulfurreducens fuel cells

21 June 2018

1 reference

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Bug juice: harvesting electricity with microorganisms

21 June 2018

1 reference

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Microbial fuel cells: novel microbial physiologies and engineering approaches

21 June 2018

1 reference

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Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Anaerobic Oxidation of Toluene, Phenol, and p-Cresol by the Dissimilatory Iron-Reducing Organism, GS-15

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reduction of iron or manganese

21 June 2018

1 reference

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Rapid assay for microbially reducible ferric iron in aquatic sediments

21 June 2018

1 reference

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Geobacter bemidjiensis sp. nov. and Geobacter psychrophilus sp. nov., two novel Fe(III)-reducing subsurface isolates

21 June 2018

1 reference

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Extracellular electron transfer via microbial nanowires

21 June 2018

1 reference

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Growth of Geobacter sulfurreducens under nutrient-limiting conditions in continuous culture

21 June 2018

1 reference

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Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments.

21 June 2018

1 reference

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Dissimilatory Fe(III) and Mn(IV) reduction

21 June 2018

1 reference

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Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states.

21 June 2018

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Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater

21 June 2018

1 reference

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Preferential reduction of FeIII over fumarate by Geobacter sulfurreducens.

21 June 2018

1 reference

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An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Electricity production by Geobacter sulfurreducens attached to electrodes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Evidence for iron-dependent nitrate respiration in the dissimilatory iron-reducing bacterium Geobacter metallireducens

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Metabolic modeling of microbial strains in silico.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Direct and Fe(II)-mediated reduction of technetium by Fe(III)-reducing bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities

21 June 2018

1 reference

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Geobacter metallireducens gen. nov. sp. nov., a microorganism capable of coupling the complete oxidation of organic compounds to the reduction of iron and other metals

21 June 2018

1 reference

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Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Geobacter sulfurreducens strain engineered for increased rates of respiration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Gene clusters involved in anaerobic benzoate degradation of Geobacter metallireducens.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Biochemical and genetic evidence of benzylsuccinate synthase in toluene-degrading, ferric iron-reducing Geobacter metallireducens.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Electrode-reducing microorganisms that harvest energy from marine sediments

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2640342

Benzoyl-CoA reductase (dearomatizing), a key enzyme of anaerobic aromatic metabolism. A study of adenosinetriphosphatase activity, ATP stoichiometry of the reaction and EPR properties of the enzyme

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19175927

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1752-0509-3-15

1 reference

journals/bmcsb/SunSBPFFSLM09

26 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

26 July 2017

1 reference