Estimating the false discovery rate using mixed normal distribution for identifying differentially expressed genes in microarray data analysis. (Q33448588)

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English	Estimating the false discovery rate using mixed normal distribution for identifying differentially expressed genes in microarray data analysis.	scientific article

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28 January 2020

Estimating the false discovery rate using mixed normal distribution for identifying differentially expressed genes in microarray data analysis (English)

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28 January 2020

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Akihiro Hirakawa

1

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28 January 2020

Yasunori Sato

2

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28 January 2020

Takashi Sozu

3

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28 January 2020

Chikuma Hamada

4

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28 January 2020

Isao Yoshimura

5

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28 January 2020

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22 January 2008

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28 January 2020

Cancer Informatics

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28 January 2020

3

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28 January 2020

140-148

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28 January 2020

Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting

1 reference

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21 June 2018

Robust estimation of the false discovery rate.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

How accurately can we control the FDR in analyzing microarray data?

1 reference

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21 June 2018

Multidimensional local false discovery rate for microarray studies.

1 reference

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21 June 2018

A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data

1 reference

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21 June 2018

Sample size for FDR-control in microarray data analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

Statistical significance for genomewide studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

A mixture model approach to detecting differentially expressed genes with microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values

1 reference

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21 June 2018

Statistical methods for ranking differentially expressed genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

Identifying differentially expressed genes using false discovery rate controlling procedures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

A comparative review of statistical methods for discovering differentially expressed genes in replicated microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

An efficient and robust statistical modeling approach to discover differentially expressed genes using genomic expression profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

21 June 2018

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes

1 reference

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21 June 2018

On differential variability of expression ratios: improving statistical inference about gene expression changes from microarray data

1 reference

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21 June 2018

Significance analysis of microarrays applied to the ionizing radiation response

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21 June 2018

Importance of replication in microarray gene expression studies: statistical methods and evidence from repetitive cDNA hybridizations

1 reference

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21 June 2018

Parallel human genome analysis: microarray-based expression monitoring of 1000 genes

1 reference

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21 June 2018

Parametric and nonparametric FDR estimation revisited.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

31 October 2018

Bias in the estimation of false discovery rate in microarray studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

31 October 2018

Significance testing for small microarray experiments

1 reference

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31 October 2018

False discovery rate, sensitivity and sample size for microarray studies.

1 reference

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31 October 2018

Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer

1 reference

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31 October 2018

On the use of permutation in and the performance of a class of nonparametric methods to detect differential gene expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675830

31 October 2018

Ratio-based decisions and the quantitative analysis of cDNA microarray images

1 reference

https://pubmed.ncbi.nlm.nih.gov/19455258

12 December 2020

based on heuristic

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Modified nonparametric approaches to detecting differentially expressed genes in replicated microarray experiments

1 reference

https://pubmed.ncbi.nlm.nih.gov/19455258

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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Europe PubMed Central

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28 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19455258%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

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