Relative power and sample size analysis on gene expression profiling data. (Q33503913)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19758461%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

Relative power and sample size analysis on gene expression profiling data (English)

1 reference

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7 February 2020

2

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7 February 2020

Guido Jej Hooiveld

4

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7 February 2020

author name string

M van Iterson

1

1 reference

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7 February 2020

P Pedotti

3

1 reference

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7 February 2020

J T den Dunnen

5

1 reference

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7 February 2020

G J B van Ommen

6

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7 February 2020

J M Boer

7

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7 February 2020

R X Menezes

8

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7 February 2020

language of work or name

English

0 references

publication date

17 September 2009

1 reference

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7 February 2020

1 reference

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7 February 2020

volume

10

1 reference

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7 February 2020

issue

1

1 reference

13 September 2019

page(s)

439

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describes a project that uses

7 February 2020

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/2759969

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-439

0 references

cites work

Practical guidelines for assessing power and false discovery rate for a fixed sample size in microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Can subtle changes in gene expression be consistently detected with different microarray platforms?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Effect of synthetic dietary triglycerides: a novel research paradigm for nutrigenomics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

A mixture model approach to sample size estimation in two-sample comparative microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Quick calculation for sample size while controlling false discovery rate with application to microarray analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Approximate sample size calculations with microarray data: an illustration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Sample size for FDR-control in microarray data analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Bioconductor: open software development for computational biology and bioinformatics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Peroxisome proliferator-activated receptors: nuclear control of metabolism

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Exploring the information in p-values for the analysis and planning of multiple-test experiments.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Power and sample size for DNA microarray studies

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759969

Statistical design and the analysis of gene expression microarray data

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19758461

12 December 2020

inferred from PubMed ID database lookup

Genome-wide analysis of PPARα activation in murine small intestine

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19758461

12 December 2020

inferred from PubMed ID database lookup

Performance comparison of one-color and two-color platforms within the MicroArray Quality Control (MAQC) project

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19758461

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2164-10-439

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19758461%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

7 February 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-439

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19758461%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference