Database search strategies for proteomic data sets generated by electron capture dissociation mass spectrometry. (Q33509857)

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9 February 2020

title

Database search strategies for proteomic data sets generated by electron capture dissociation mass spectrometry (English)

1 reference

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9 February 2020

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9 February 2020

Andrew W Jones

2

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9 February 2020

Debbie L Cunningham

3

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9 February 2020

John K Heath

4

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9 February 2020

Helen J. Cooper

6

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9 February 2020

5

Andrew J Creese

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9 February 2020

publication date

1 December 2009

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Journal of Proteome Research

9 February 2020

published in

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9 February 2020

volume

8

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9 February 2020

issue

12

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9 February 2020

page(s)

5475-5484

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On-line liquid chromatography electron capture dissociation for the characterization of phosphorylation sites in proteins

9 February 2020

cites work

1 reference

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Increasing information from shotgun proteomic data by accounting for misassigned precursor ion masses

28 July 2018

1 reference

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Comparison of Mascot and X!Tandem performance for low and high accuracy mass spectrometry and the development of an adjusted Mascot threshold

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Electron capture dissociation in the analysis of protein phosphorylation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Hydrogen rearrangement to and from radical z fragments in electron capture dissociation of peptides.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Evaluation of several MS/MS search algorithms for analysis of spectra derived from electron transfer dissociation experiments

28 July 2018

1 reference

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Post-acquisition ETD spectral processing for increased peptide identifications

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Analytical utility of small neutral losses from reduced species in electron capture dissociation studied using SwedECD database.

31 October 2018

1 reference

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Improving protein identification using complementary fragmentation techniques in fourier transform mass spectrometry

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

The role of electron capture dissociation in biomolecular analysis.

31 October 2018

1 reference

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Characterization of amino acid side chain losses in electron capture dissociation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2788916

Strategy for the Identification of Sites of Phosphorylation in Proteins: Neutral Loss Triggered Electron Capture Dissociation

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19821632

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ion activation in electron capture dissociation to distinguish between N-terminal and C-terminal product ions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19821632

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Letter: The Diagnostic Value of Amino Acid Side-Chain Losses in Electron Capture Dissociation of Polypeptides. Comment on: “Can the (M.−X) Region in Electron Capture Dissociation Provide Reliable Information on Amino Acid Composition of Polypepti

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19821632

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/PR9008282

1 reference

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9 February 2020

1 reference

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9 February 2020

PubMed publication ID

19821632

1 reference