ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery (Q33510272)

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English	ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery	scientific article

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scholarly article

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Europe PubMed Central

27 July 2017

1 reference

Europe PubMed Central

ConservedPrimers 2.0: a high-throughput pipeline for comparative genome referenced intron-flanking PCR primer design and its application in wheat SNP discovery (English)

1 reference

Europe PubMed Central

27 July 2017

1 reference

based on heuristic

inferred from title

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based on heuristic

inferred from title

object named as

Gerard R Lazo

4

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5

object named as

Jan Dvorak

1 reference

Europe PubMed Central

27 July 2017

1

object named as

Frank M You

1 reference

Europe PubMed Central

27 July 2017

author name string

Naxin Huo

2

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Europe PubMed Central

27 July 2017

Yong Q Gu

3

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Europe PubMed Central

27 July 2017

Olin D Anderson

6

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Europe PubMed Central

27 July 2017

publication date

13 October 2009

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Europe PubMed Central

27 July 2017

BMC Bioinformatics

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Europe PubMed Central

27 July 2017

10

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Europe PubMed Central

27 July 2017

331

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Europe PubMed Central

27 July 2017

copyright license

Creative Commons Attribution 2.0 Generic

13 October 2009

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April 2022 Public Data File from Crossref

copyright status

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April 2022 Public Data File from Crossref

https://scigraph.springernature.com/pub.10.1186/1471-2105-10-331

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UniPrime2: a web service providing easier Universal Primer design

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21 June 2018

The Sorghum bicolor genome and the diversification of grasses

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21 June 2018

BatchPrimer3: a high throughput web application for PCR and sequencing primer design

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

UniPrime: a workflow-based platform for improved universal primer design

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

The nuclear genome of Brachypodium distachyon: analysis of BAC end sequences

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Patterns of selective constraints in noncoding DNA of rice

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A general pipeline for the development of anchor markers for comparative genomics in plants

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GeMprospector--online design of cross-species genetic marker candidates in legumes and grasses

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EST sequencing and phylogenetic analysis of the model grass Brachypodium distachyon

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Structure and architecture of the maize genome.

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FESD: a Functional Element SNPs Database in human

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21 June 2018

Deletion polymorphism in wheat chromosome regions with contrasting recombination rates

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

A sequence-based genetic map of Medicago truncatula and comparison of marker colinearity with M. sativa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

Functional constraints and frequency of deleterious mutations in noncoding DNA of rodents

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

SNPs by AFLP (SBA): a rapid SNP isolation strategy for non-model organisms

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

Large-scale comparison of intron positions among animal, plant, and fungal genes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

Primer3 on the WWW for general users and for biologist programmers

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

Reliable identification of large numbers of candidate SNPs from public EST data

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

21 June 2018

dbEST--database for "expressed sequence tags"

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21 June 2018

Basic local alignment search tool

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21 June 2018

Genome-specific primer sets for starch biosynthesis genes in wheat

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

31 October 2018

Single nucleotide polymorphism (SNP) discovery in mammals: a targeted-gene approach.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

31 October 2018

Intron size and genome size in plants

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

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Single-nucleotide polymorphism characterization in species with limited available sequence information: high nucleotide diversity revealed in the avian genome.

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Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2765976

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Contrasting population structure from nuclear intron sequences and mtDNA of humpback whales

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The use of AFLP to find an informative SNP: genetic differences across a migratory divide in willow warblers

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Expeditor: a pipeline for designing primers using human gene structure and livestock animal EST information

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https://pubmed.ncbi.nlm.nih.gov/19825183

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Intron-flanking EST-PCR markers: from genetic marker development to gene structure analysis in Rhododendron

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https://pubmed.ncbi.nlm.nih.gov/19825183

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https://pubmed.ncbi.nlm.nih.gov/19825183

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Identifiers

10.1186/1471-2105-10-331

1 reference

Europe PubMed Central

27 July 2017

DBLP publication ID

journals/bmcbi/YouHGLDA09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

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1 reference

Europe PubMed Central

27 July 2017

1 reference

Europe PubMed Central

27 July 2017

ResearchGate publication ID

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