The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes (Q33518458)

27 July 2017

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The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes (English)

1 reference

27 July 2017

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8

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Christelle Desnues

10

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Folker Meyer

19

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John McPherson

18

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Baoli Zhu

27

object named as

Baoli Zhu

1 reference

27 July 2017

28

Forest Rohwer

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Robert K Naviaux

1 reference

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David L Kirchman

1 reference

27 July 2017

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Matthew T Cottrell

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Rebecca Vega-Thurber

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Florent E Angly

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27 July 2017

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Matthew Haynes

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27 July 2017

25

Linda Wegley

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27 July 2017

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Elizabeth A Dinsdale

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27 July 2017

Dana Willner

2

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27 July 2017

Alejandra Prieto-Davó

3

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27 July 2017

Robert A Edwards

4

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27 July 2017

Robert Schmieder

5

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Dionysios A Antonopoulos

7

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27 July 2017

Mike Furlan

12

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Matthew R Henn

14

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Yongfei Hu

15

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Tracey McDole

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R Michael Miller

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Egbert Mundt

21

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Beltran Rodriguez-Mueller

23

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27 July 2017

Rick Stevens

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Lixin Zhang

26

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27 July 2017

11 December 2009

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PLOS Computational Biology

27 July 2017

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27 July 2017

5

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27 July 2017

e1000593

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Creative Commons Attribution 4.0 International

27 July 2017

start time

11 December 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The genomic basis of trophic strategy in marine bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Diverse circovirus-like genome architectures revealed by environmental metagenomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Metagenomic signatures of 86 microbial and viral metagenomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Metagenomics reveals our incomplete knowledge of global diversity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Burden or benefit? Virus-host interactions in the marine environment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

On the origin of prokaryotic "species": the taxonomy of halophilic Archaea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Functional metagenomic profiling of nine biomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Biodiversity and biogeography of phages in modern stromatolites and thrombolites.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Microbial ecology of four coral atolls in the Northern Line Islands.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Metagenomics: read length matters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Get the most out of your metagenome: computational analysis of environmental sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Large variabilities in host strain susceptibility and phage host range govern interactions between lytic marine phages and their Flavobacterium hosts.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

CAMERA: a community resource for metagenomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

MEGAN analysis of metagenomic data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

The marine viromes of four oceanic regions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Visualization of comparative genomic analyses by BLAST score ratio

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Comparative genomic structure of prokaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Trends between gene content and genome size in prokaryotic species with larger genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Are viruses driving microbial diversification and diversity?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Haloarchaeal viruses: how diverse are they?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

The Phage Proteomic Tree: a genome-based taxonomy for phage

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Database resources of the National Center for Biotechnology Information.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Population dynamics of chesapeake bay virioplankton: total-community analysis by pulsed-field gel electrophoresis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

The closest BLAST hit is often not the nearest neighbor.

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

PulseNet standardized protocol for subtyping Listeria monocytogenes by macrorestriction and pulsed-field gel electrophoresis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

Prediction of effective genome size in metagenomic samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

Virioplankton community structure along a salinity gradient in a solar saltern.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

Evolution of protein superfamilies and bacterial genome size

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

Microbiology: metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

Metagenomic analysis of stressed coral holobionts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

Pulsed-field gel electrophoresis analysis of virus assemblages present in a hypersaline environment

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2781106

Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiae

31 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000593

COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20011103

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1000593

1 reference

journals/ploscb/AnglyWPESVABCDDFHHHKMMMMMNRSWZZR09

27 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

27 July 2017

1 reference