Quantifying DNA melting transitions using single-molecule force spectroscopy (Q33521725)

27 July 2017

title

Quantifying DNA melting transitions using single-molecule force spectroscopy (English)

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27 July 2017

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2

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Kuan-Jiuh Lin

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Nolan Harris

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object named as

Nolan C Harris

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Ching-Hwa Kiang

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author name string

Christopher P Calderon

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27 July 2017

publication date

1 January 2009

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Journal of Physics: Condensed Matter

27 July 2017

published in

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27 July 2017

volume

21

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27 July 2017

issue

3

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27 July 2017

page(s)

34114

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Bayesian estimates of free energies from nonequilibrium work data in the presence of instrument noise

27 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Molecular force balance measurements reveal that double-stranded DNA unbinds under force in rate-dependent pathways

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

There and (slowly) back again: entropy-driven hysteresis in a model of DNA overstretching

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Configuration-dependent diffusion can shift the kinetic transition state and barrier height of protein folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Dissecting the multistep reaction pathway of an RNA enzyme by single-molecule kinetic "fingerprinting".

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Mechanisms of DNA binding determined in optical tweezers experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Viscoelastic study of the mechanical unfolding of a protein by AFM.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Sub-angstrom conformational changes of a single molecule captured by AFM variance analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Frequency modulation atomic force microscopy reveals individual intermediates associated with each unfolded I27 titin domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Calculating potentials of mean force from steered molecular dynamics simulations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Mechanically probing the folding pathway of single RNA molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

DNA unzipped under a constant force exhibits multiple metastable intermediates

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Mechanical stability of single DNA molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Sequence-dependent mechanics of single DNA molecules.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Two heads of myosin are better than one for generating force and motion.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Ionic effects on the elasticity of single DNA molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Approximating nonequilibrium processes using a collection of surrogate diffusion models.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Direct measurements of base stacking interactions in DNA by single-molecule atomic-force spectroscopy.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

On the use of local diffusion models for path ensemble averaging in potential of mean force computations

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Breathing dynamics in heteropolymer DNA.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Theory of high-force DNA stretching and overstretching

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2684650

Structural biology. Dynamic visions of enzymatic reactions

31 October 2018

1 reference

12 December 2020

Experimental free energy surface reconstruction from single-molecule force spectroscopy using Jarzynski's equality

1 reference

12 December 2020

Overstretching and force-driven strand separation of double-helix DNA

1 reference

12 December 2020

Mechanics of binding of a single integration-host-factor protein to DNA

1 reference

12 December 2020

10.1088/0953-8984/21/3/034114

Identifiers

DOI

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27 July 2017

1 reference

27 July 2017

1 reference