BLAST-EXPLORER helps you building datasets for phylogenetic analysis. (Q33523387)

27 July 2017

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title

BLAST-EXPLORER helps you building datasets for phylogenetic analysis. (English)

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27 July 2017

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Alexis Dereeper

series ordinal

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object named as

Alexis Dereeper

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27 July 2017

12 January 2010

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27 July 2017

BMC Evolutionary Biology

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27 July 2017

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27 July 2017

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https://scigraph.springernature.com/pub.10.1186/1471-2148-10-8

27 July 2017

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cites work

OrthoSelect: a protocol for selecting orthologous groups in phylogenomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

HaMStR: profile hidden markov model based search for orthologs in ESTs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

Assessing performance of orthology detection strategies applied to eukaryotic genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

Database resources of the National Center for Biotechnology Information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

TreeDyn: towards dynamic graphics and annotations for analyses of trees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

PhyloGenie: automated phylome generation and analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2821324

PhyloBLAST: facilitating phylogenetic analysis of BLAST results

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20067610

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2148-10-8

1 reference

PubMed ID

20067610

Dimensions Publication ID

27 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-10-8

9 September 2019

1 reference

27 July 2017

1 reference

PubMed ID

20067610