Incorporating sequence quality data into alignment improves DNA read mapping (Q33527204)

27 July 2017

Incorporating sequence quality data into alignment improves DNA read mapping (English)

1 reference

27 July 2017

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1 reference

Raymond Wan

2

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Martin C Frith

object named as

Martin C Frith

series ordinal

1

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author name string

Paul Horton

series ordinal

3

1 reference

PubMed ID

20110255

27 July 2017

language of work or name

English

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publication date

27 January 2010

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27 July 2017

Nucleic Acids Research

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27 July 2017

38

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27 July 2017

7

1 reference

27 July 2017

e100

1 reference

Recount: expectation maximization based error correction tool for next generation sequencing data

27 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Mapping short DNA sequencing reads and calling variants using mapping quality scores

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

New developments in ancient genomics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Diploid genome reconstruction of Ciona intestinalis and comparative analysis with Ciona savignyi

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

PatternHunter: faster and more sensitive homology search

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2853142

The effect of sequence quality on sequence alignment.

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ010

Alignment of biological sequences with quality scores.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ010

Improved sensitivity of nucleic acid database searches using application-specific scoring matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ010

Replacing suffix trees with enhanced suffix arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ010

Multiseed lossless filtration.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ010

21 January 2018

Identifiers

DOI

10.1093/NAR/GKQ010

1 reference

27 July 2017

1 reference

27 July 2017

1 reference

PubMed ID

20110255