Peptide identification from mixture tandem mass spectra (Q33547009)

27 July 2017

Peptide identification from mixture tandem mass spectra (English)

1 reference

27 July 2017

5

Nuno Bandeira

1 reference

27 July 2017

Jian Wang

1

1 reference

27 July 2017

Josué Pérez-Santiago

series ordinal

2

1 reference

27 July 2017

Jonathan E Katz

series ordinal

3

1 reference

27 July 2017

Parag Mallick

series ordinal

4

1 reference

27 July 2017

27 March 2010

1 reference

Molecular & Cellular Proteomics

27 July 2017

1 reference

27 July 2017

9

1 reference

27 July 2017

7

1 reference

27 July 2017

1476-1485

1 reference

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

27 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Network-assisted protein identification and data interpretation in shotgun proteomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Mass spectrometry identifies and quantifies 74 unique histone H4 isoforms in differentiating human embryonic stem cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Clustering millions of tandem mass spectra

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

MSNovo: a dynamic programming algorithm for de novo peptide sequencing via tandem mass spectrometry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Protein identification by spectral networks analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Development and validation of a spectral library searching method for peptide identification from MS/MS.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Use of an integrated MS--multiplexed MS/MS data acquisition strategy for high-coverage peptide mapping studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

ProteomeCommons.org IO Framework: reading and writing multiple proteomics data formats

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Analysis of peptide MS/MS spectra from large-scale proteomics experiments using spectrum libraries

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Using annotated peptide mass spectrum libraries for protein identification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

NovoHMM: a hidden Markov model for de novo peptide sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

PepNovo: de novo peptide sequencing via probabilistic network modeling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

TANDEM: matching proteins with tandem mass spectra

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

Probability-based protein identification by searching sequence databases using mass spectrometry data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2938093

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M000136-MCP201

Shotgun protein sequencing by tandem mass spectra assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M000136-MCP201

ModifiComb, a new proteomic tool for mapping substoichiometric post-translational modifications, finding novel types of modifications, and fingerprinting complex protein mixtures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M000136-MCP201

Identification of tryptic peptides from large databases using multiplexed tandem mass spectrometry: simulations and experimental results

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M000136-MCP201

Impact of ion trap tandem mass spectra variability on the identification of peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M000136-MCP201

10.1074/MCP.M000136-MCP201

21 January 2018

Identifiers

DOI

1 reference

27 July 2017

1 reference

27 July 2017

1 reference