Supercoiling, knotting and replication fork reversal in partially replicated plasmids (Q33559373)

28 July 2017

title

Supercoiling, knotting and replication fork reversal in partially replicated plasmids (English)

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28 July 2017

1 reference

L Olavarrieta

1

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28 July 2017

M L Martínez-Robles

2

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28 July 2017

J M Sogo

3

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28 July 2017

A Stasiak

4

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28 July 2017

P Hernández

5

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28 July 2017

D B Krimer

6

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28 July 2017

J B Schvartzman

7

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28 July 2017

language of work or name

English

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publication date

1 February 2002

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28 July 2017

published in

Nucleic Acids Research

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28 July 2017

volume

30

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28 July 2017

issue

3

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28 July 2017

page(s)

656-666

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Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled

28 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

RecA protein promotes the regression of stalled replication forks in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Replication fork arrest and DNA recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Replication and recombination intersect

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Mechanisms and consequences of replication fork arrest.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The importance of repairing stalled replication forks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Mechanisms of separation of the complementary strands of DNA during replication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Visualisation of plasmid replication intermediates containing reversed forks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Knot what we thought before: the twisted story of replication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Escherichia coli SeqA protein affects DNA topology and inhibits open complex formation at oriC.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The structure of supercoiled intermediates in DNA replication

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Topological complexity of different populations of pBR322 as visualized by two-dimensional agarose gel electrophoresis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Trade-off between segregational stability and metabolic burden: a mathematical model of plasmid ColE1 replication control

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Processing of recombination intermediates by the RuvABC proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The ColE1 unidirectional origin acts as a polar replication fork pausing site.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Analysis of replication intermediates by two-dimensional agarose gel electrophoresis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The interaction of closed circular DNA with intercalative dyes. I. The superhelix density of SV40 DNA in the presence and absence of dye.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Identification of the DNA sequence from the E. coli terminus region that halts replication forks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The localization of replication origins on ARS plasmids in S. cerevisiae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Increased production of a knotted form of plasmid pBR322 DNA in Escherichia coli DNA topoisomerase mutants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

The presence of the region on pBR322 that encodes resistance to tetracycline is responsible for high levels of plasmid DNA knotting in Escherichia coli DNA topoisomerase I deletion mutant

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Evidence that replication initiates at only some of the potential origins in each oligomeric form of bovine papillomavirus type 1 DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Unidirectional replication as visualized by two-dimensional agarose gel electrophoresis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Equilibrium, kinetic, and footprinting studies of the Tus-Ter protein-DNA interaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Uptake of homologous single-stranded fragments by superhelical DNA: a possible mechanism for initiation of genetic recombination

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Positive torsional strain causes the formation of a four-way junction at replication forks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=100290

Terminal stages of SV40 DNA replication proceed via multiply intertwined catenated dimers

31 October 2018

1 reference

12 December 2020

A model for replication repair in mammalian cells

1 reference

12 December 2020

Separation of branched from linear DNA by two-dimensional gel electrophoresis

1 reference

12 December 2020

Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H

1 reference

12 December 2020

Initiation of DNA replication in ColE1 plasmids containing multiple potential origins of replication

1 reference

12 December 2020

Inactivation of the replication-termination system affects the replication mode and causes unstable maintenance of plasmid R1

1 reference

12 December 2020

Mechanistic studies on the impact of transcription on sequence-specific termination of DNA replication and vice versa

1 reference

12 December 2020

A computer model for the analysis of DNA replication intermediates by two-dimensional agarose gel electrophoresis

1 reference

12 December 2020

RuvAB acts at arrested replication forks

1 reference

12 December 2020

DnaB helicase is unable to dissociate RNA-DNA hybrids. Its implication in the polar pausing of replication forks at ColE1 origins

1 reference

12 December 2020

Formation of knots in partially replicated DNA molecules

1 reference

12 December 2020

Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression

1 reference

12 December 2020

Premature termination of DNA replication in plasmids carrying two inversely oriented ColE1 origins

1 reference

12 December 2020

RuvABC-dependent double-strand breaks in dnaBts mutants require recA

1 reference

12 December 2020

Arrest of segregation leads to accumulation of highly intertwined catenated dimers: Dissection of the final stages of SV40 DNA replication

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/30.3.656

1 reference

28 July 2017

1 reference

28 July 2017

1 reference