Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns (Q33568125)

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English	Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 July 2017

Genome-wide DNA methylation measurements in prostate tissues uncovers novel prostate cancer diagnostic biomarkers and transcription factor binding patterns (English)

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Europe PubMed Central

PubMed publication ID

28 July 2017

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DNA methylation

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prostate cancer

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based on heuristic

inferred from title

Brittany N Lasseigne

4

object named as

Brittany N Lasseigne

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Europe PubMed Central

PubMed publication ID

28 July 2017

author name string

Marie K Kirby

1

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Europe PubMed Central

PubMed publication ID

28 July 2017

Ryne C Ramaker

2

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Europe PubMed Central

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28 July 2017

Brian S Roberts

3

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Europe PubMed Central

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28 July 2017

David S Gunther

5

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Europe PubMed Central

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28 July 2017

Todd C Burwell

6

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Europe PubMed Central

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28 July 2017

Nicholas S Davis

7

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Europe PubMed Central

PubMed publication ID

28 July 2017

Zulfiqar G Gulzar

8

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Europe PubMed Central

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28 July 2017

Devin M Absher

9

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28 July 2017

Sara J Cooper

10

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Europe PubMed Central

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28 July 2017

James D Brooks

11

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28 July 2017

Richard M Myers

12

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28 July 2017

language of work or name

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publication date

17 April 2017

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Europe PubMed Central

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28 July 2017

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Europe PubMed Central

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28 July 2017

17

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Europe PubMed Central

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28 July 2017

1

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Europe PubMed Central

PubMed publication ID

28 July 2017

273

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28 July 2017

describes a project that uses

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DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Epigenomic profiling of DNA methylation in paired prostate cancer versus adjacent benign tissue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Diverse involvement of EZH2 in cancer epigenetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

DNA methylation status is more reliable than gene expression at detecting cancer in prostate biopsy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Transcriptional Activity of Heparan Sulfate Biosynthetic Machinery is Specifically Impaired in Benign Prostate Hyperplasia and Prostate Cancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Clinical validation of an epigenetic assay to predict negative histopathological results in repeat prostate biopsies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Promotion of cancer cell invasiveness and metastasis emergence caused by olfactory receptor stimulation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

RefSeq: an update on mammalian reference sequences

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14 July 2018

Early detection of prostate cancer: AUA Guideline

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

EZH2, an epigenetic driver of prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Genome-wide methylation analysis of prostate tissues reveals global methylation patterns of prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

PCA3 in the detection and management of early prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

DNA methylation alterations exhibit intraindividual stability and interindividual heterogeneity in prostate cancer metastases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

EZH2 oncogenic activity in castration-resistant prostate cancer cells is Polycomb-independent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Identification of new differentially methylated genes that have potential functional consequences in prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Clinical utility of an epigenetic assay to detect occult prostate cancer in histopathologically negative biopsies: results of the MATLOC study

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

A tissue biopsy-based epigenetic multiplex PCR assay for prostate cancer detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Proteoglycans in prostate cancer

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Glycosaminoglycans: key players in cancer cell biology and treatment

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Transposase mediated construction of RNA-seq libraries.

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14 July 2018

A decade of exploring the cancer epigenome - biological and translational implications

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14 July 2018

Urine TMPRSS2:ERG fusion transcript stratifies prostate cancer risk in men with elevated serum PSA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome

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14 July 2018

DNA methylation profiling reveals novel biomarkers and important roles for DNA methyltransferases in prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Metallothionein 1E is methylated in malignant melanoma and increases sensitivity to cisplatin-induced apoptosis.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

DNA methylation based biomarkers in non-invasive cancer screening

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14 July 2018

BEDTools: a flexible suite of utilities for comparing genomic features

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TopHat: discovering splice junctions with RNA-Seq

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14 July 2018

Expression changes in EZH2, but not in BMI-1, SIRT1, DNMT1 or DNMT3B are associated with DNA methylation changes in prostate cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Prostate-specific antigen and prostate cancer: prediction, detection and monitoring.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

GENCODE: producing a reference annotation for ENCODE

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Adjusting batch effects in microarray expression data using empirical Bayes methods

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14 July 2018

The Polycomb group protein EZH2 directly controls DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5392915

14 July 2018

Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

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14 July 2018

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

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Multiple markers for melanoma progression regulated by DNA methylation: insights from transcriptomic studies

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14 July 2018

GSTP1 CpG island hypermethylation is responsible for the absence of GSTP1 expression in human prostate cancer cells

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14 July 2018

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14 July 2018

The usefulness of the detection of GSTP1 methylation in urine as a biomarker in the diagnosis of prostate cancer.

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A quantitative promoter methylation profile of prostate cancer.

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Global methylation profiling for risk prediction of prostate cancer.

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The Molecular Taxonomy of Primary Prostate Cancer

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Prostate cancer: Urinary PCA3 and TMPRSS2:ERG reduce the need for repeat biopsy

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12 December 2020

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10.1186/S12885-017-3252-2

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Europe PubMed Central

PubMed publication ID

28 July 2017

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PMC publication ID

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Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

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Europe PubMed Central

PubMed publication ID

28 July 2017

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