Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples (Q33602009)

28 July 2017

title

Improved HF183 quantitative real-time PCR assay for characterization of human fecal pollution in ambient surface water samples (English)

1 reference

28 July 2017

0 references

R Knight

8

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Orin C Shanks

11

object named as

Orin C Shanks

1 reference

28 July 2017

7

William A Walters

1 reference

28 July 2017

Hyatt C Green

1

1 reference

28 July 2017

Richard A Haugland

2

1 reference

28 July 2017

Manju Varma

3

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28 July 2017

Hana T Millen

4

1 reference

28 July 2017

Mark A Borchardt

5

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28 July 2017

Katharine G Field

6

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28 July 2017

Mano Sivaganesan

9

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28 July 2017

Catherine A Kelty

10

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28 July 2017

language of work or name

English

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publication date

7 March 2014

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Applied and Environmental Microbiology

28 July 2017

published in

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28 July 2017

volume

80

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28 July 2017

issue

10

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28 July 2017

page(s)

3086-3094

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Evaluation of the repeatability and reproducibility of a suite of qPCR-based microbial source tracking methods

28 July 2017

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

21 June 2018

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21 June 2018

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Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon

21 June 2018

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21 June 2018

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21 June 2018

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Practical considerations in design of internal amplification controls for diagnostic PCR assays

21 June 2018

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A PCR assay To discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study.

30 October 2018

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Performance of forty-one microbial source tracking methods: a twenty-seven lab evaluation study.

30 October 2018

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Measuring and mitigating inhibition during quantitative real time PCR analysis of viral nucleic acid extracts from large-volume environmental water samples

30 October 2018

1 reference

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Sensitive detection of sample interference in environmental qPCR.

30 October 2018

1 reference

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Effectiveness of qPCR permutations, internal controls and dilution as means for minimizing the impact of inhibition while measuring Enterococcus in environmental waters.

30 October 2018

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30 October 2018

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Combining land use information and small stream sampling with PCR-based methods for better characterization of diffuse sources of human fecal pollution

30 October 2018

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Quantitative identification of fecal water pollution sources by TaqMan real-time PCR assays using Bacteroidales 16S rRNA genetic markers.

30 October 2018

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Performance of PCR-based assays targeting Bacteroidales genetic markers of human fecal pollution in sewage and fecal samples.

30 October 2018

1 reference

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Evaluation of genetic markers from the 16S rRNA gene V2 region for use in quantitative detection of selected Bacteroidales species and human fecal waste by qPCR.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018914

Evaluation of new gyrB-based real-time PCR system for the detection of B. fragilis as an indicator of human-specific fecal contamination

30 October 2018

1 reference

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Identifying human and livestock sources of fecal contamination in Kenya with host-specific Bacteroidales assays

30 October 2018

1 reference

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Evaluation of Bacteroides markers for the detection of human faecal pollution.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018914

16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018914

Validation of host-specific Bacteriodales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim countries of the European Union.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018914

Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018914

Interlaboratory Comparison of Real-Time PCR Protocols for Quantification of General Fecal Indicator Bacteria

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4018914

10 December 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/24610857

12 December 2020

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