CRISPR-Cas: an adaptive immunity system in prokaryotes (Q33607825)

28 July 2017

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title

CRISPR-Cas: an adaptive immunity system in prokaryotes (English)

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28 July 2017

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1

Eugene V Koonin

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28 July 2017

2

Kira S Makarova

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28 July 2017

publication date

1 December 2009

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28 July 2017

published in

F1000 biology reports

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28 July 2017

volume

1

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28 July 2017

page(s)

95

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Prokaryotic homologs of Argonaute proteins are predicted to function as key components of a novel system of defense against mobile genetic elements

28 July 2017

cites work

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CRISPR-based adaptive and heritable immunity in prokaryotes

21 June 2018

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Structural basis for DNase activity of a conserved protein implicated in CRISPR-mediated genome defense

21 June 2018

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Short motif sequences determine the targets of the prokaryotic CRISPR defence system

21 June 2018

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Origins and Mechanisms of miRNAs and siRNAs

21 June 2018

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Regulatory RNAs in bacteria

21 June 2018

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Characterization of the endonuclease SSO2001 from Sulfolobus solfataricus P2.

21 June 2018

1 reference

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Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

21 June 2018

1 reference

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CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

21 June 2018

1 reference

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Genomics of bacteria and archaea: the emerging dynamic view of the prokaryotic world

21 June 2018

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Small CRISPR RNAs guide antiviral defense in prokaryotes

21 June 2018

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Virus population dynamics and acquired virus resistance in natural microbial communities

21 June 2018

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A novel family of sequence-specific endoribonucleases associated with the clustered regularly interspaced short palindromic repeats

21 June 2018

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CRISPRcompar: a website to compare clustered regularly interspaced short palindromic repeats.

21 June 2018

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CRISPR--a widespread system that provides acquired resistance against phages in bacteria and archaea

21 June 2018

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Phage response to CRISPR-encoded resistance in Streptococcus thermophilus

21 June 2018

1 reference

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Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus

21 June 2018

1 reference

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Rapidly evolving CRISPRs implicated in acquired resistance of microorganisms to viruses.

21 June 2018

1 reference

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CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

21 June 2018

1 reference

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Chromosome evolution in the Thermotogales: large-scale inversions and strain diversification of CRISPR sequences

21 June 2018

1 reference

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A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

Mobile genetic elements: the agents of open source evolution

21 June 2018

1 reference

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Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

21 June 2018

1 reference

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The COG database: an updated version includes eukaryotes

21 June 2018

1 reference

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Identification of genes that are associated with DNA repeats in prokaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

Identification of a novel family of sequence repeats among prokaryotes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

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Nature of DNA polymorphism in the direct repeat cluster of Mycobacterium tuberculosis; application for strain differentiation by a novel typing method

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

Restriction-modification systems as genomic parasites in competition for specific sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

Comparative analysis of CRISPR loci in lactic acid bacteria genomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2884157

30 October 2018

Identifiers

DOI

10.3410/B1-95

1 reference

28 July 2017

1 reference

28 July 2017

1 reference