A brief review of molecular techniques to assess plant diversity (Q33608701)

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5 February 2020

review article

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title

A brief review of molecular techniques to assess plant diversity (English)

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2 August 2019

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16 September 2019

biomedical investigative technique

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19 September 2019

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22 October 2019

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5 February 2020

author name string

Ibrahim A Arif

1

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5 February 2020

Mohammad A Bakir

2

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5 February 2020

Ahmad H Al Farhan

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5 February 2020

Ali A Al Homaidan

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5 February 2020

Ali H Bahkali

6

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5 February 2020

Mohammad Al Sadoon

7

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5 February 2020

Mohammad Shobrak

8

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5 February 2020

language of work or name

English

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publication date

10 May 2010

6 references

20 June 2019

2 August 2019

16 September 2019

19 September 2019

22 October 2019

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International Journal of Molecular Sciences

5 February 2020

published in

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22 October 2019

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volume

11

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issue

5

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page(s)

2079-2096

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Creative Commons Attribution 3.0 Unported

5 February 2020

copyright license

5 references

20 June 2019

2 August 2019

16 September 2019

19 September 2019

AFLP-based molecular characterization of an elite germplasm collection of Jatropha curcas L., a biofuel plant

22 October 2019

0 references

1 reference

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Microsatellites, from molecules to populations and back

21 June 2018

1 reference

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Microsatellites and kinship

21 June 2018

1 reference

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Generation and analysis of expressed sequence tags from the medicinal plant Salvia miltiorrhiza

21 June 2018

1 reference

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Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping.

21 June 2018

1 reference

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Assembly algorithms for next-generation sequencing data

21 June 2018

1 reference

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Single nucleotide polymorphisms for assessing genetic diversity in castor bean (Ricinus communis).

21 June 2018

1 reference

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Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)

21 June 2018

1 reference

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Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama

21 June 2018

1 reference

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21 June 2018

Direct RNA sequencing

1 reference

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A DNA barcode for land plants

21 June 2018

1 reference

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Sequence diversity in three tomato species: SNPs, markers, and molecular evolution

21 June 2018

1 reference

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Continuous base identification for single-molecule nanopore DNA sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Advantages and disadvantages of molecular phylogenetics: a case study of ascaridoid nematodes.

21 June 2018

1 reference

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Applications of next-generation sequencing technologies in functional genomics

21 June 2018

1 reference

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Next-generation sequencing transforms today's biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Genetic diversity analysis and conservation of the endangered Chinese endemic herb Dendrobium officinale Kimura et Migo (Orchidaceae) based on AFLP.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Genetic variation in the endangered Anisodus tanguticus (Solanaceae), an alpine perennial endemic to the Qinghai-Tibetan Plateau

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

The history of pyrosequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

High RAPD but no cpDNA sequence variation in the endemic and endangered plant, Heptacodium miconioides Rehd. (Caprifoliaceae)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Phylogeny and biogeography of Croton alabamensis (Euphorbiaceae), a rare shrub from Texas and Alabama, using DNA sequence and AFLP data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Using high-throughput SNP technologies to study cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

SNPs in forensic genetics: a review on SNP typing methodologies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Genome sequencing in microfabricated high-density picolitre reactors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Use of DNA barcodes to identify flowering plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Genetic structure of the endangered plant Neolitsea sericea (Lauraceae) from the Zhoushan archipelago using RAPD markers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

SNPWave: a flexible multiplexed SNP genotyping technology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Sequence information can be obtained from single DNA molecules

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Progress in high throughput SNP genotyping methods

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Taxonomy and identification of the Burkholderia cepacia complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Diversity arrays: a solid state technology for sequence information independent genotyping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

The GAA triplet-repeat expansion in Friedreich ataxia interferes with transcription and may be associated with an unusual DNA structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Real-time DNA sequencing using detection of pyrophosphate release

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Genetic diagnostics in plant breeding: RAPDs, microsatellites and machines

21 June 2018

1 reference

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Use of automated sequencing of polymerase chain reaction-generated amplicons to identify three types of cholera toxin subunit B in Vibrio cholerae O1 strains

21 June 2018

1 reference

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AFLP: a new technique for DNA fingerprinting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Construction of a genetic linkage map in man using restriction fragment length polymorphisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

The molecular basis of evolution.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Direct solid phase sequencing of genomic and plasmid DNA using magnetic beads as solid support.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

A system for rapid DNA sequencing with fluorescent chain-terminating dideoxynucleotides

21 June 2018

1 reference

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Basic local alignment search tool

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

DNA polymorphisms amplified by arbitrary primers are useful as genetic markers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: an example from the compositae

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Variations in the cytomegalovirus major immediate-early gene found by direct genomic sequencing

21 June 2018

1 reference

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DNA sequencing with chain-terminating inhibitors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Using AFLP to resolve phylogenetic relationships in a morphologically diversified plant species complex when nuclear and chloroplast sequences fail to reveal variability.

21 June 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Phylogenetics of Seed Plants: An Analysis of Nucleotide Sequences from the Plastid Gene rbcL

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Phenotypic and RAPD diversity among 80 germplasm accessions of the medicinal plant isabgol (Plantago ovata, Plantaginaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Ecological risk assessment using RAPD and distribution pattern of a rare and endangered species

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Conservation genetics of the rare and endangered Leucopogon obtectus (Ericaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Application of multiplex single nucleotide primer extension (mSNuPE) to the identification of bacteria: the Burkholderia cepacia complex case

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Next generation molecular ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Phylogeny and quaternary history of the European montane/alpine endemic Soldanella (Primulaceae) based on ITS and AFLP variation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Use of AFLP markers in surveys of plant diversity

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2885095

Molecular Techniques in the Assessment of Botanical Diversity

30 October 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Comparative assessment of EST-SSR, EST-SNP and AFLP markers for evaluation of genetic diversity and conservation of genetic resources using wild, cultivated and elite barleys

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

AFLPs are incompatible with RAPD and morphological data in Pennisetum purpureum (Napier grass)

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FIJMS11052079

Isolation of microsatellite loci from the endangered plant Galium catalinense subspecies acrispum (Rubiaceae)

21 January 2018

1 reference

12 December 2020

Comparative analysis of phylogenetic relationships of grain amaranths and their wild relatives (Amaranthus; Amaranthaceae) using internal transcribed spacer, amplified fragment length polymorphism, and double-primer fluorescent intersimple sequence

1 reference

12 December 2020

Species relationships in Lactuca s.l. (Lactuceae, Asteraceae) inferred from AFLP fingerprints

1 reference

12 December 2020

The use of AFLP markers in conservation genetics--a case study on Pulsatilla vernalis in the Polish lowlands

1 reference

12 December 2020

Single-nucleotide polymorphism detection in plants using a single-stranded pyrosequencing protocol with a universal biotinylated primer

1 reference

12 December 2020

Genotyping of apolipoprotein E: comparative evaluation of different protocols

1 reference

12 December 2020

The random amplification of polymorphic DNA for fingerprinting plants

1 reference

12 December 2020

Identifiers

DOI

10.3390/IJMS11052079

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20559503%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20559503%20AND%20SRC:MED&resulttype=core&format=json

5 February 2020

PubMed publication ID

20559503

1 reference