Haplotype information and linkage disequilibrium mapping for single nucleotide polymorphisms (Q33679094)

28 July 2017

Haplotype information and linkage disequilibrium mapping for single nucleotide polymorphisms (English)

1 reference

single-nucleotide polymorphism

28 July 2017

1 reference

1 reference

linkage disequilibrium

1 reference

Xin Lu

1

1 reference

PubMed ID

12952879

28 July 2017

Tianhua Niu

series ordinal

2

1 reference

PubMed ID

12952879

28 July 2017

Jun S Liu

series ordinal

3

1 reference

28 July 2017

1 September 2003

1 reference

28 July 2017

1 reference

28 July 2017

13

1 reference

28 July 2017

9

1 reference

28 July 2017

2112-2117

1 reference

Causative and susceptibility genes for Alzheimer's disease: a review.

28 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

The structure of haplotype blocks in the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Fine-scale mapping of disease loci via shattered coalescent modeling of genealogies.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Bayesian haplotype inference for multiple linked single-nucleotide polymorphisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Apolipoprotein E: far more than a lipid transport protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Bayesian analysis of haplotypes for linkage disequilibrium mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Intensely punctate meiotic recombination in the class II region of the major histocompatibility complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

The effect that genotyping errors have on the robustness of common linkage-disequilibrium measures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

A New Statistical Method for Haplotype Reconstruction from Population Data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Initial sequencing and analysis of the human genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Genetic analysis of case/control data using estimated haplotype frequencies: application to APOE locus variation and Alzheimer's disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Accuracy of haplotype frequency estimation for biallelic loci, via the expectation-maximization algorithm for unphased diploid genotype data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

SNPing away at complex diseases: analysis of single-nucleotide polymorphisms around APOE in Alzheimer disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Assessment of linkage disequilibrium by the decay of haplotype sharing, with application to fine-scale genetic mapping

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Fine genetic mapping using haplotype analysis and the missing data problem

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

The apolipoprotein E polymorphism in Greenland Inuit in its global perspective.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

An E-M algorithm and testing strategy for multiple-locus haplotypes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Arginine residues at codons 112 and 158 in the apolipoprotein E gene correspond to the ancestral state in humans.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

HAPLO: a program using the EM algorithm to estimate the frequencies of multi-site haplotypes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Maximum-likelihood estimation of molecular haplotype frequencies in a diploid population

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Identification of the cystic fibrosis gene: genetic analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Inference of haplotypes from PCR-amplified samples of diploid populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Partition-ligation-expectation-maximization algorithm for haplotype inference with single-nucleotide polymorphisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Statistical estimation and pedigree analysis of CCR2-CCR5 haplotypes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

A measure of phase ambiguity in pairs of SNPs in the presence of linkage disequilibrium.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=403705

Loss of information due to ambiguous haplotyping of SNPs

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12952879

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

GOLD--graphical overview of linkage disequilibrium

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12952879

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.586803

1 reference

28 July 2017

1 reference

28 July 2017

1 reference

PubMed ID

12952879