A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism (Q33699546)

28467421

28 July 2017

title

A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism (English)

1 reference

nitrogen catabolic enzyme regulatory protein

28 July 2017

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VAD-2, variant 1

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VAD-2

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transcriptional activator hac1

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Alpha-amylase

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ammonium transporter MEP1

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MFS lactose permease

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Glucoamylase

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starch binding domain-containing protein

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glutamine synthetase, variant 1

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Glutamine synthetase

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sugar transporter-9

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endoglucanase IV

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neutral amino acid permease

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uracil permease

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arginine transporter

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fungal specific transcription factor

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Alpha-glucosidase

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homeobox domain-containing protein

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oxidase assembly protein 2, variant 1

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oxidase assembly protein 2

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zinc finger transcription factor-17

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cross-pathway control protein 1

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cellobiose dehydrogenase-2

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sugar transporter-29

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MFS monosaccharide transporter

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11

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28467421%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Siwen Deng

5

1 reference

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8 June 2020

Vasanth R. Singan

8

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8 June 2020

Kerrie Barry

9

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8 June 2020

N Louise Glass

12

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8 June 2020

10

Trent R Northen

1 reference

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8 June 2020

author name string

Yi Xiong

1

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8 June 2020

Vincent W Wu

2

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8 June 2020

Andrea Lubbe

3

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8 June 2020

Lina Qin

4

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8 June 2020

Megan Kennedy

6

1 reference

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8 June 2020

Diane Bauer

7

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8 June 2020

language of work or name

1 reference

3 May 2017

1 reference

28 July 2017

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8 June 2020

volume

13

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8 June 2020

issue

5

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8 June 2020

page(s)

e1006737

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Creative Commons CC0 License

8 June 2020

copyright license

start time

3 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

describes a project that uses

DESeq2

object named as

DESeq2

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Direct target network of the Neurospora crassa plant cell wall deconstruction regulators CLR-1, CLR-2, and XLR-1.

21 June 2018

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21 June 2018

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Deletion of homologs of the SREBP pathway results in hyper-production of cellulases in Neurospora crassa and Trichoderma reesei.

21 June 2018

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Cellobionic acid utilization: from Neurospora crassa to Saccharomyces cerevisiae

21 June 2018

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The bZIP Transcription Factor HAC-1 Is Involved in the Unfolded Protein Response and Is Necessary for Growth on Cellulose in Neurospora crassa

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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VIB1, a link between glucose signaling and carbon catabolite repression, is essential for plant cell wall degradation by Neurospora crassa

21 June 2018

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The proteome and phosphoproteome of Neurospora crassa in response to cellulose, sucrose and carbon starvation.

21 June 2018

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Evidence of a critical role for cellodextrin transporte 2 (CDT-2) in both cellulose and hemicellulose degradation and utilization in Neurospora crassa

21 June 2018

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Transcriptional comparison of the filamentous fungus Neurospora crassa growing on three major monosaccharides D-glucose, D-xylose and L-arabinose.

21 June 2018

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MycoCosm portal: gearing up for 1000 fungal genomes.

21 June 2018

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21 June 2018

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Characterising the role of GABA and its metabolism in the wheat pathogen Stagonospora nodorum

21 June 2018

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21 June 2018

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Analysis of a conserved cellulase transcriptional regulator reveals inducer-independent production of cellulolytic enzymes in Neurospora crassa

21 June 2018

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Long-term strain improvements accumulate mutations in regulatory elements responsible for hyper-production of cellulolytic enzymes.

21 June 2018

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21 June 2018

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Structural Basis for Substrate Targeting and Catalysis by Fungal Polysaccharide Monooxygenases

21 June 2018

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21 June 2018

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21 June 2018

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A new Zn(II)(2)Cys(6)-type transcription factor BglR regulates β-glucosidase expression in Trichoderma reesei.

21 June 2018

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21 June 2018

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21 June 2018

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A broader role for AmyR in Aspergillus niger: regulation of the utilisation of D-glucose or D-galactose containing oligo- and polysaccharides

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Transcriptomic comparison of Aspergillus niger growing on two different sugars reveals coordinated regulation of the secretory pathway

21 June 2018

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Aspergillus niger genome-wide analysis reveals a large number of novel alpha-glucan acting enzymes with unexpected expression profiles

21 June 2018

1 reference

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Transcriptional profiling of cross pathway control in Neurospora crassa and comparative analysis of the Gcn4 and CPC1 regulons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

VIB-1 is required for expression of genes necessary for programmed cell death in Neurospora crassa

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 June 2018

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A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors

21 June 2018

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21 June 2018

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MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 June 2018

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21 June 2018

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rco-3, a gene involved in glucose transport and conidiation in Neurospora crassa.

21 June 2018

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Regulation of trehalose mobilization in fungi

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

Regulation of nitrogen metabolism and gene expression in fungi

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

A versatile transformation system for the cellulolytic filamentous fungus Trichoderma reesei.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

The cross-pathway control gene of Neurospora crassa, cpc-1, encodes a protein similar to GCN4 of yeast and the DNA-binding domain of the oncogene v-jun-encoded protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

Depression of uracil uptake by ammonium in Neurospora crassa

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5435353

Molecular cloning and characterization of a transcriptional activator gene, amyR, involved in the amylolytic gene expression in Aspergillus oryzae

21 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Characterization of the amyR gene encoding a transcriptional activator for the amylase genes in Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Transcription factor ART1 mediates starch hydrolysis and mycotoxin production in Fusarium graminearum and F. verticillioides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Transcriptional response to glucose starvation and functional analysis of a glucose transporter of Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Cellobiose dehydrogenase and a copper-dependent polysaccharide monooxygenase potentiate cellulose degradation by Neurospora crassa

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Two conidiation-related Zn(II)2Cys6 transcription factor genes in the rice blast fungus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Evidence that gamma-aminobutyric acid is a major nitrogen source during Cladosporium fulvum infection of tomato

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Global gene expression analysis of Aspergillus nidulans reveals metabolic shift and transcription suppression under hypoxia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Genome-wide analysis of maltose utilization and regulation in aspergilli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Neurospora V. A Synthetic Medium Favoring Sexual Reproduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1006737

Regulation of the amylolytic and (hemi-)cellulolytic genes in aspergilli

21 January 2018

1 reference

12 December 2020

The role of glutamine synthetase and glutamine metabolism in nitrogen metabolite repression, a regulatory phenomenon in the lower eukaryote Neurospora crassa

1 reference

12 December 2020

Mutants affecting amino acid cross-pathway control inNeurospora crassa

1 reference

12 December 2020

Induction and repression of alpha-amylase production in batch and continuous cultures of Aspergillus oryzae

1 reference

12 December 2020

Metabolic fate of glutamate and evaluation of flux through the 4-aminobutyrate (GABA) shunt in Aspergillus niger

1 reference

12 December 2020

A new transcriptional activator for amylase genes in Aspergillus

1 reference

12 December 2020

Cyclosporin A-resistance based gene placement system for Neurospora crassa

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1006737

Identifiers

DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28467421%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

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8 June 2020

28467421

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