Complete genome sequence and comparative genomic analyses of the vancomycin-producing Amycolatopsis orientalis (Q33722342)

28 July 2017

Complete genome sequence and comparative genomic analyses of the vancomycin-producing Amycolatopsis orientalis (English)

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28 July 2017

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Amycolatopsis orientalis

1 reference

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whole genome sequencing

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Li Xu

1

1 reference

28 July 2017

He Huang

2

1 reference

28 July 2017

Wei Wei

3

1 reference

28 July 2017

Yi Zhong

4

1 reference

28 July 2017

Biao Tang

5

1 reference

28 July 2017

Hua Yuan

6

1 reference

28 July 2017

Li Zhu

7

1 reference

28 July 2017

Weiyi Huang

8

1 reference

28 July 2017

Mei Ge

9

1 reference

28 July 2017

Shen Yang

10

1 reference

28 July 2017

Huajun Zheng

11

1 reference

28 July 2017

Weihong Jiang

12

1 reference

28 July 2017

Daijie Chen

13

1 reference

28 July 2017

Guo-Ping Zhao

14

1 reference

28 July 2017

Wei Zhao

15

1 reference

28 July 2017

language of work or name

English

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publication date

13 May 2014

1 reference

full work available at URL

28 July 2017

https://bmcgenomics.biomedcentral.com/counter/pdf/10.1186/1471-2164-15-363

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1186/1471-2164-15-363?email=unpaywall_01@example.com

published in

BMC Genomics

1 reference

28 July 2017

15

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28 July 2017

363

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28 July 2017

1

1 reference

http://api.crossref.org/works/10.1186%2F1471-2164-15-363

describes a project that uses

MUMmer

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1186/1471-2164-15-363?email=unpaywall_01@example.com

access restriction status

open access

1 reference

inferred from online access status

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-363

0 references

cites work

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Genome Sequence of the Vancomycin-Producing Amycolatopsis orientalis subsp. orientalis Strain KCTC 9412T.

21 June 2018

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Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy

21 June 2018

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21 June 2018

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Genome sequence of Amycolatopsis sp. strain ATCC 39116, a plant biomass-degrading actinomycete

21 June 2018

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21 June 2018

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Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699.

21 June 2018

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Emerging knowledge of regulatory roles of D-amino acids in bacteria

21 June 2018

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Occurrence, biosynthesis and function of isoprenoid quinones

21 June 2018

1 reference

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SBSPKS: structure based sequence analysis of polyketide synthases

21 June 2018

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A comparative review of the lipoglycopeptides: oritavancin, dalbavancin, and telavancin

21 June 2018

1 reference

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Waves of resistance: Staphylococcus aureus in the antibiotic era.

21 June 2018

1 reference

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Structure and function of the glycopeptide N-methyltransferase MtfA, a tool for the biosynthesis of modified glycopeptide antibiotics

21 June 2018

1 reference

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Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350

21 June 2018

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The RAST Server: rapid annotations using subsystems technology

21 June 2018

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Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica

21 June 2018

1 reference

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Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution

21 June 2018

1 reference

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Biosynthesis of chloro-beta-hydroxytyrosine, a nonproteinogenic amino acid of the peptidic backbone of glycopeptide antibiotics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4048454

NRPS-PKS: a knowledge-based resource for analysis of NRPS/PKS megasynthases

21 June 2018

1 reference

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Characterization of a regiospecific epivancosaminyl transferase GtfA and enzymatic reconstitution of the antibiotic chloroeremomycin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4048454

METABOLISM AND FUNCTION OF BACTERIAL LIPIDS. II. BIOSYNTHESIS OF PHOSPHOLIPIDS IN ESCHERICHIA COLI

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4048454

Structure of the TDP-epi-vancosaminyltransferase GtfA from the chloroeremomycin biosynthetic pathway

21 June 2018

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Infection with vancomycin-resistant Staphylococcus aureus containing the vanA resistance gene

21 June 2018

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Vancomycin assembly: nature's way.

21 June 2018

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Crystal structure of OxyB, a cytochrome P450 implicated in an oxidative phenol coupling reaction during vancomycin biosynthesis

21 June 2018

1 reference

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Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)

21 June 2018

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Structure of the UDP-glucosyltransferase GtfB that modifies the heptapeptide aglycone in the biosynthesis of vancomycin group antibiotics

21 June 2018

1 reference

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Heterologous expression in Escherichia coli of the first module of the nonribosomal peptide synthetase for chloroeremomycin, a vancomycin-type glycopeptide antibiotic

21 June 2018

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Chain-length determination mechanism of isoprenyl diphosphate synthases and implications for molecular evolution.

21 June 2018

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Identification and analysis of the balhimycin biosynthetic gene cluster and its use for manipulating glycopeptide biosynthesis in Amycolatopsis mediterranei DSM5908

21 June 2018

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Glycopeptide antibiotic resistance genes in glycopeptide-producing organisms

21 June 2018

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Sequencing and analysis of genes involved in the biosynthesis of a vancomycin group antibiotic

21 June 2018

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D-Ala-D-Ala ligases from glycopeptide antibiotic-producing organisms are highly homologous to the enterococcal vancomycin-resistance ligases VanA and VanB

21 June 2018

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Production of hybrid glycopeptide antibiotics in vitro and in Streptomyces toyocaensis

21 June 2018

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Bacterial resistance to vancomycin: five genes and one missing hydrogen bond tell the story

21 June 2018

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Structure-activity relationships of vancomycin-type glycopeptide antibiotics

21 June 2018

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Chemotaxonomy of Bacteroides: a review

21 June 2018

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A proposal for the transfer of Streptomyces mediterranei margalith and beretta 1960 to the genus Nocardia as Nocardia mediterranea (margalith and beretta) Comb. Nov

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4048454

Glycopeptide biosynthesis in Amycolatopsis mediterranei DSM5908: function of a halogenase and a haloperoxidase/perhydrolase

21 June 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Tandem action of glycosyltransferases in the maturation of vancomycin and teicoplanin aglycones: novel glycopeptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Incorporation of glucose analogs by GtfE and GtfD from the vancomycin biosynthetic pathway to generate variant glycopeptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Cloning and expression of a cytochrome P450 hydroxylase gene from Amycolatopsis orientalis: hydroxylation of epothilone B for the production of epothilone F.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Complete genome sequence of the rifamycin SV-producing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Genomic analyses lead to novel secondary metabolites. Part 3. ECO-0501, a novel antibacterial of a new class.

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Generation of D amino acid residues in assembly of arthrofactin by dual condensation/epimerization domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

Oxidative phenol coupling reactions catalyzed by OxyB: a cytochrome P450 from the vancomycin producing organism. implications for vancomycin biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-363

In-vitro effects of vancomycin, rifampicin, and fusidic acid, alone and in combination, against methicillin-resistant Staphylococcus aureus.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4048454

Participation of Soluble Phophatidylserine Synthetase in Phosphatidylethanolamine Biosynthesis in Escherichia coli Membrane

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24884615

12 December 2020

inferred from PubMed ID database lookup

Classification of antibiotics-quinones of actinomycetic origin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24884615

12 December 2020

inferred from PubMed ID database lookup

Streptomyces orientalis, n. sp., the source of vancomycin

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24884615

12 December 2020

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Two New Genera of Nocardioform Actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov.

1 reference

12 April 2024

https://opencitations.net/index/api/v1/references/10.1186/1471-2164-15-363

Identification and Analysis of the Balhimycin Biosynthetic Gene Cluster and Its Use for Manipulating Glycopeptide Biosynthesis in Amycolatopsis mediterranei DSM5908

1 reference

12 April 2024

https://opencitations.net/index/api/v1/references/10.1186/1471-2164-15-363

Identifiers

DOI

10.1186/1471-2164-15-363

1 reference

Dimensions Publication ID

28 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-363

9 September 2019

1 reference

28 July 2017

1 reference